| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3712 |
|---|
| Symbol | |
|---|
| ID | 5154526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3888835 |
|---|
| End bp | 3890136 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640558550 |
|---|
| Product | putative acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| Protein accession | YP_001239696 |
|---|
| Protein GI | 148255111 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTC TGGACATCCC GGATCGGGGC GCGGCCAGCC TGGCTGGCGC CTTCGCGGCG
ATCGAGCGGC TGTCCGAAAC CGCGGTGGAT GATTTGCGCA GCATGGTGGC GGTCGACACC
AGCTTTCCGC CGGGCGCCGG CTATGAGGCC TTTGCCGATC TGATGGAGCA GCTCGCTGTC
CCGCTGGCGC TGGATTGCGA GCGCGTGATC GTTCCCGAGG AGCTTTGGCG GGCGCCCGGC
GCGCGCGGGC AGCGCACGAA CCTGATTGCG CGGCGCCGCT CCGGCCGGCC GGTGCTCGGG
CTGTATTTCC ACGTCGACAC CGTGCCGGCG GCGCCCGGTT GGGCCGGTGA TCCGCTGCAG
CTCGCCCGCG AGGGTGATCG CCTGTTCGGC CTCGGCGCTG CGGACATGAA GGGATCGATA
GCGGCTGCGC TGCTCGCATT GCGCGCCGCG CAGCAGACGG GCCTAGTGCT CGCTTATGAT
CCGATGCTGC TGCTGTGCAC GGACGAGGAG GCCGGGCTCT ATCCGGGCGT CCGCTATCTT
GCAGAGCAGG GACGCCTCGA AGGGCACATT CTGAACTTCA ACGGCAGCGC CATGCCGCGA
ATCTGGGCCG GCTGCTTCGG CCTGTTCACG CTGACGGTGC GCGTGCGCGG CAAAGCGGCC
CATGCCGGCG AGCAGCGCAG CGCCGGCGCC AATGCGATCG AAGCGGCGCT GCCGATCCTC
ACTGCGCTCG CCGGCCTGAA GCCCGTGATC GCGCAGCGGA CGTCGGCCTT GCCGCCACCG
CCGCAGGCAA CCGGGCCGCT CACCGCGAGC CTCGACATCT CGGCCGTTCA TGGCGGGCAG
TGTGGCGGAC AGATCCCGTC GCAGTTCGAG ATCCTGTTGT GCCGCCGCTA CGCCCCCGAA
GAGCAGTTTG CCGCCGCGCG CAGCGAGATC GAGACCGTGA TCAGGCAGGC CGCAAGCGGC
CTCGATCTCG ACATCATCCT CACCGGTCAT CTGGCGCCGA CCGCCGACCC CGGCGGTCCC
CACTGGCCGC GCTGGCAGCG GGCGCTTTCG GCCGGGTTCG GTTACGCCGC CGAGGACTTC
GCACGCTGGG GCGCCTCCGG CTGCTCCGAT TTCGGCTGGG TGCAGCAGGC CACCGGCATG
CAGGAGGTGC TGCTCACCGG TCTCGGCAAG CCCGACAGCC GCATTCACGC GCCAGGCGAG
TCGACCACGC TGACCGACAT CGTCGCATTG GCGAAATCGG TGCTGGCCTA TCTTTCAGTC
GAGTTCTGTC CCGAACTCTC TCCCGAAACC ATGACGCCCT AA
|
|---|
| Protein sequence | MISLDIPDRG AASLAGAFAA IERLSETAVD DLRSMVAVDT SFPPGAGYEA FADLMEQLAV
PLALDCERVI VPEELWRAPG ARGQRTNLIA RRRSGRPVLG LYFHVDTVPA APGWAGDPLQ
LAREGDRLFG LGAADMKGSI AAALLALRAA QQTGLVLAYD PMLLLCTDEE AGLYPGVRYL
AEQGRLEGHI LNFNGSAMPR IWAGCFGLFT LTVRVRGKAA HAGEQRSAGA NAIEAALPIL
TALAGLKPVI AQRTSALPPP PQATGPLTAS LDISAVHGGQ CGGQIPSQFE ILLCRRYAPE
EQFAAARSEI ETVIRQAASG LDLDIILTGH LAPTADPGGP HWPRWQRALS AGFGYAAEDF
ARWGASGCSD FGWVQQATGM QEVLLTGLGK PDSRIHAPGE STTLTDIVAL AKSVLAYLSV
EFCPELSPET MTP
|
|---|
| |