Gene BBta_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3645 
Symbol 
ID5153270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3813842 
End bp3814906 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID640558489 
Producthypothetical protein 
Protein accessionYP_001239635 
Protein GI148255050 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.409441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TGTCGCACCT GCTGCAGCAG AGCAGTGCTC ACGCATGGCT CTTCGTTCCG 
AGCGCGATTC TTCTCGGCGC GCTGCATGGT CTCGAGCCCG GCCATTCCAA GACCATGATG
GCCGCTTTCA TCGTTGCGAT CCGTGGCACG GTCTTCCAGG CCGTGCTTCT TGGACTGTCG
GCGACGATCT CGCACACGGC GGTGGTATGG GCGGTCGCCT TTCTCGGCCT CTACTTCGGC
CACGATCTCT CCGGAGAGCG CAGCGAAGCC TATCTCCAGA TCGCGTCTGC ACTCATCATC
CTCGGAGTCG CCGCGTGGAT GGTCTGGCGC ACCTGGCGCG GGACGACCGA GGAGCACGGC
CACGATCATC ACCAGGACGA ACCGCAGGCC GTCTCGCTCG CGGGCAGGAC GCTTTCGATC
GCGGTGTTCG AGACCGGCGT TCCGCCGCGC TGGCGGATTT CCAGCGACGC AGGTGGCCTC
CCTTCCGCCG CGGACATCGG GGTGACGACA GTCCGTGCCG ATGGCAGCGA ACAGAGCTTC
GCGTTCGTCG ACCGCGACGG ATATCTGGAG AGCACCGAGG AGATTCCGGA ACCGCACGCC
TTCAAGGCAC GCATCGCACT CGCGGGCGAT GTCGCCGAAA TGCGTTTCGG GGAGCACGAT
CACGACCACA TGGACCTCGG GGAACAGGAT GACGCGCACG CTCGCGCTCA TGCCGCCGAC
ATCCAAAGGC GCTTCGCCGG ACGCACCGTC ACCACACCGC AGATCGTCCT GTTCGGTCTC
ACCGGCGGCC TAATCCCGTG CCCGGCAGCC ATTACAGTTC TTCTGCTCTG TATTCAGTTG
AAGCAGTTCA GCCTCGGCTT CGCACTGGTG CTCTGCTTTG GCCTCGGCCT CGCCATCACC
ATGGTATCGG CCGGCGTCGT TGCCGCTCTC GGTATTCGGC ACGTCGAACG CCATTGGAGC
GGCTTCAGCC GCTTCGCACA TCGCGCGCCC TACGTCTCGG CGGCCTTGAT CGCCCTGGTC
GGGCTCTACA CCGGCTGGAT CGGCCTGCAT GAGTTCGCGT CGTGA
 
Protein sequence
MTDLSHLLQQ SSAHAWLFVP SAILLGALHG LEPGHSKTMM AAFIVAIRGT VFQAVLLGLS 
ATISHTAVVW AVAFLGLYFG HDLSGERSEA YLQIASALII LGVAAWMVWR TWRGTTEEHG
HDHHQDEPQA VSLAGRTLSI AVFETGVPPR WRISSDAGGL PSAADIGVTT VRADGSEQSF
AFVDRDGYLE STEEIPEPHA FKARIALAGD VAEMRFGEHD HDHMDLGEQD DAHARAHAAD
IQRRFAGRTV TTPQIVLFGL TGGLIPCPAA ITVLLLCIQL KQFSLGFALV LCFGLGLAIT
MVSAGVVAAL GIRHVERHWS GFSRFAHRAP YVSAALIALV GLYTGWIGLH EFAS