Gene BBta_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3562 
Symbol 
ID5151677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3719690 
End bp3720253 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID640558414 
Producthypothetical protein 
Protein accessionYP_001239560 
Protein GI148254975 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.520528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG ATCTCGTCCA GACCTTTCGT GCCTTCGCCT ACAACAATGC CTGGGCCAAC 
CATCGCCTGC TGACCGCCTG CGGCGAGCTC AGCGCCGACG ACTTCGCGGC TGCGCGCACC
GGCTTCTTTC CCAGCCTGCA GAAGACGCTG AACCACATCT ACATCATCGA CCTGTTCTAT
ATCGACGCGC TGGAAGGCGG CTGGCTCGGC CCGATGGCGT GGCAGAACGA GGTGCCGTTC
CCGCGCCTCT CCGACCTCGT GAAGGCGCAG AGCGCGATGG ACCGCCGGCT GATCGCGTTC
TGCGAGGCGC TGACGCCGGC ACGGCTCGAC GAGACCGTCC GCATCAACCG CGAGAGCCGG
GTGCAAAACG AACGCTGCGA CCGGCTGCTG CTGCATCTGT TCCAGCACGA TATCCATCAC
CGCGGCCAGG CCCATGCGAT GCTGTCAGCC ACATCAACCA AGCCGCCACA ACTGGACGAG
TTCTTTCCGG CGGACGATGC GGCGCTGCGG ACGAAGGATT TCGCCGAACT CGGCTTCAGC
GAAGAGAAGG TGTGGCGGAG CTGA
 
Protein sequence
MPADLVQTFR AFAYNNAWAN HRLLTACGEL SADDFAAART GFFPSLQKTL NHIYIIDLFY 
IDALEGGWLG PMAWQNEVPF PRLSDLVKAQ SAMDRRLIAF CEALTPARLD ETVRINRESR
VQNERCDRLL LHLFQHDIHH RGQAHAMLSA TSTKPPQLDE FFPADDAALR TKDFAELGFS
EEKVWRS