Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3526 |
Symbol | |
ID | 5150687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3677946 |
End bp | 3679697 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640558378 |
Product | hypothetical protein |
Protein accession | YP_001239525 |
Protein GI | 148254940 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.543626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGA CATCCTTCGG ACGCGTAATC TCGGTGCGAG GCTCCCAGGC CCGCGTCGGC ATTCTGTCGA CCCAGCAGAT GACCGTTTCC GAGATCCGCG CGACAGTCGG CCGCTTCATC AGCATCCGCT GCCCGAGCGC CACGATCATC GCGATCATCA CCGAGGTCAC CAGTGAGGAC CTGTCGCAGG CCCACGACTA TGTCGCGACC GCGTCGGTGG ACCTGCTCGG CGAGATCCTC GGCCCCGCCG AGCGGCCGAA ATTCCAGCGC GGCGTCACCC ATTATCCGAC CATCGGCGAC GCCGTCGACA TGATCACCAG CCAGGAGCTG CGCACGATCT ACACGCCGAC GGCAGGCGAC CATATCGACA TCGGCGCCCT GCAGCAGGAC ACCAGCGTGC GCGCCTGCGT CAATGTCGAG GAAATGCTGT CGAAGCATTT CGCGGTGCTC GGATCGACCG GCGTCGGCAA ATCGACCGGC GTGTCGCTGC TGCTCAACGA GATCCTCAAA GCCCGGCCGA ACCTGCGCAT CTTCCTGCTC GACGTCCACA ACGAATATGG CCGCTGCTTC GGCGAACGCG CGCTGGTGCT GAACCCGCGC AATCTGAAGC TGCCGTTCTG GCTGTTCAAT TTCGAGGAGA TTGTCGACGT CCTGTTCGGC GGCCGCCCCG GCGTGCCGGA GGAGCTCGAT ATTCTCGCCG AGGTGATCCC GCTGGCGAAG GGCATCTACA CCCAGTACCA GAATACGGAC CGCATCGGGC TGAAGCGGAT CGATCCCAAG ACCGTCGGCT ACACCGTCGA TACGCCGGTG CCGTATCGCC TCGTCGACCT GATCAGCCTG ATCGACGAGC GCATGGGCAA GCTGGAGAAC CGCTCCTCGC GCATCATCTA TCACAAGCTG ATCTCGCGCA TCGAGACCGT GCGCAACGAC CCGCGCTACG CCTTCATGTT CGACAACGCC AATGTCGGCG GCGACACCAT GGCGGAGGTC ATCAGCCATC TGTTCCGCCT GCCGGCGAAC GGCCGGCCGA TGACGGTGAT GCAACTCGCC GGCTTCCCGG CCGAGGTGGT CGATTCCGTC GTCTCCGTGG TCTGCCGCAT GGCGTTCGAT TTCGGCCTGT GGAGCGACGG CGTCTCGCCG CTATTGTTCG TCTGCGAGGA GGCGCATCGC TATGCCTCCG CCGACCGCTC GATCGGGTTC GGCCCAACCC GCAAGGCGAT CTCGCGCATC GCCAAGGAAG GCCGCAAATA CGGTGTCTAT CTCGGCCTGA TCACCCAGCG CCCGGCCGAG CTCGACGCGA CCATCATCTC CCAGTGCAAT ACGCTGTTCA CGATGCGCCT CGCCAACGAG CGCGACCAGT CGCTGCTGCG CTCCGCGGTG TCCGATGCCG CCGCCAACCT GCTGTCCTTC GTGCCCTCGC TCGGCACCCG CGAGGTGCTG GCGTTCGGTG AGGGCGTGGC GCTGCCGACG CGGCTGCGCT TCAAGGAAGT GCCGCCGCAT CAATTGCCGC GCAGCGAGGC AACGATCGCC ACCGTGCGCT CCGTCAATGC CGGCCATGAC ATGCATTTCG TCGCGGCCGT TCTGGAACGC TGGCGCGGCG CCACGTCGAG CCGTGATGCG GCCGGCGACG GCGGCACGAT CAGCAGCGGC GATCGCGGCG GTCTCGCGAC CGCGCTCGAT GCCCCCATGC TGCAGCCGTC CATGGGGCTC GACCCCGACC GCTTCTCCCT GCTGAAGAAG CCGCTGCGCT AA
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Protein sequence | MTVTSFGRVI SVRGSQARVG ILSTQQMTVS EIRATVGRFI SIRCPSATII AIITEVTSED LSQAHDYVAT ASVDLLGEIL GPAERPKFQR GVTHYPTIGD AVDMITSQEL RTIYTPTAGD HIDIGALQQD TSVRACVNVE EMLSKHFAVL GSTGVGKSTG VSLLLNEILK ARPNLRIFLL DVHNEYGRCF GERALVLNPR NLKLPFWLFN FEEIVDVLFG GRPGVPEELD ILAEVIPLAK GIYTQYQNTD RIGLKRIDPK TVGYTVDTPV PYRLVDLISL IDERMGKLEN RSSRIIYHKL ISRIETVRND PRYAFMFDNA NVGGDTMAEV ISHLFRLPAN GRPMTVMQLA GFPAEVVDSV VSVVCRMAFD FGLWSDGVSP LLFVCEEAHR YASADRSIGF GPTRKAISRI AKEGRKYGVY LGLITQRPAE LDATIISQCN TLFTMRLANE RDQSLLRSAV SDAAANLLSF VPSLGTREVL AFGEGVALPT RLRFKEVPPH QLPRSEATIA TVRSVNAGHD MHFVAAVLER WRGATSSRDA AGDGGTISSG DRGGLATALD APMLQPSMGL DPDRFSLLKK PLR
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