Gene BBta_3471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3471 
Symbol 
ID5148785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3625472 
End bp3626146 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID640558323 
Productputative two-component response regulator 
Protein accessionYP_001239470 
Protein GI148254885 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTT TGATCGTCGA AGACAATGTC GAACTGTCCA AGCTGTTGTC CCAAGGGCTC 
GGCAGGGCCG GCTATGAGGT GGATGCGGTG AGCTCCGCGG CCGATGCCCG CGATGCGCTC
AGCGGCATCA GATACGCTGC CATGATTCTC GATCTCGGAT TGCCTGATGA GGATGGCTTG
GCGGTGCTGA CGGCGCTGCG CCGCGGCTCT GATCCGCTGC CGGTCATCGT GCTCACGGCG
CGGGGCGGAT TGCAGGACCG CGTCGGCGGC CTGCGCAGCG GTGCCGACGA TTACCTCGTC
AAGCCGTTCG CGCTCGAAGA ACTCGTGGCG CGGTTGGAGG CCATCCTGCG CCGTCCGGGA
CAGCTGCTCG GCCGGTCGCT CGAACTCGGC AATCTGGTCT ACGACACCGA GAGCCGGCAG
ACCTTCGTCG CCGGCACGCC TCGCACCTTC TCGGCCCGTG AGCTCTCGGT GCTGGAGATT
CTGTTGCGGC GGCAGGGCCG GGTGGTGCCG AAGAAGGCCG TCGAGGATCA CATCTTCGGC
CTGACCGGCG AGGTCGGCTC GAACGCCGTC GAGGTCTATG TGTCGCGGCT GCGCAAGCAG
CTTTCGGAAT ACGGGGCGAC CGTCGTGATC CACACCATCC GCGGGGTCGG CTACATGATG
GCGGCGGAGA AATAG
 
Protein sequence
MRLLIVEDNV ELSKLLSQGL GRAGYEVDAV SSAADARDAL SGIRYAAMIL DLGLPDEDGL 
AVLTALRRGS DPLPVIVLTA RGGLQDRVGG LRSGADDYLV KPFALEELVA RLEAILRRPG
QLLGRSLELG NLVYDTESRQ TFVAGTPRTF SARELSVLEI LLRRQGRVVP KKAVEDHIFG
LTGEVGSNAV EVYVSRLRKQ LSEYGATVVI HTIRGVGYMM AAEK