| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3462 |
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| Symbol | |
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| ID | 5152044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3610978 |
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| End bp | 3613371 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640558314 |
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| Product | hypothetical protein |
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| Protein accession | YP_001239461 |
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| Protein GI | 148254876 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.385249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC GGGACGTCTG GGGTTCGATA TCGCTGGCGG GGCTGGTTGC GGCAGGCTGG
GCGCCGGCGC CCATGGCACA TGCGCAGCAG GCCGCCAATT CGTCGGGAAA GCCGGCGGCG
GAAACCGTTC TGCCCGGCGT CACGGTCGAT GCACCACGCC CGCGACCGGT CGACGGCCGC
GCTCCCTCCG CGCGGCCGAC CTCCGCGCAG ACCGCGCGTT CTGCGCCGCG ACGTCCGCCA
GCGTCCTCCC CGGCAGCAGC CTTGTCGTCC GCCACCACCG GCCCCACGGC CACCACCCCG
CTCAATGGCA ATGCGACGCC GGCCAGCGGC AGCCGGCTCG GACTGACGGC GCGGGAGATC
CCGGCAACAG TTGAAGTGAT CGGCGCCGAG ACGCTGCGCG AGCGGGGCTA TCACACGACT
GTCGATGCCG TGAAGGGTGC CACCGGCGTC AGCGCGGGCG ATGCGCCGAA CGATGTCGGC
TTCGCGATGC GCGGCTTCCA GGGCAACCAG ATCAATGTGC TCTACAACGG CATCAACATC
GGGCCGACCG GATTCACCGC GCTGACGATG GAGACCTTCA ACCTCGATCG CGTCGAGTTT
CTGAAAGGCC CCTCCTCGCT GAGCTCGGGC CAGGGCGCGG TCGGCGGCAC CATCAACTTC
GTGACCAAGG CGCCGCACAC CGGCCCGGTC GAGAGCGAGA CCTTCATCGG CTTCGACCAG
CGCGGCACCT TCCGCAGCGG CTTCGGCTCG GGCGGCAGCA CGACCGTCCG GGGGCTCGAC
TACCGCTTCG ACATCAGCCG CACCAGGGAA GTCGGCTTCA TCGACGACAC CGAGTTCAAG
AACGTCCACG TCTCGGGCCA ATTGAACTAT CGCCTGTCCG ACAGCTTCAG GACCTTCGTC
GCGGCCGAGT TCAAAGACTA CAAGGCCAAG CCCTATGAAG GCACACCGCT GGTGCCGGTG
GCCTTCAGTG GCGCGAATGC GACCAGCGGC ATCGTTTCGG GCACCAAGGT CTCCGACTAC
AACGGCACCA ATCTCGGCGC CGTCACGATC GATGGCCGCA CGCTGTCGAC CAACTACAAT
GTGATCGACG GCCACAAAAC CATCAAGGAG TCATGGGTGC GCAGCGGCTT CGAATGGGAC
CTCAACAACG CCGTCACGCT GCGGAGCCAG ATCTACAACT ACAATGCCAG CCGCGACTGG
TACAACAACG AGGTGTCGGC GTTCAACGCC GGGACCAACC TGGTCGACCG CGAGCGCTTC
TTCGTCCACC ACAACCACAA CATCGTCGGC AACGTTACCG ACGTCACCTG GAACGGCAGT
ATCTTCGGCC TGTCCAATCG CATGGTCGCG TCGGTCGAGA GCTCGCACAC CGACTTCACG
CGGCCCGGCG CGGCGAACTT TCCCGGCGAG TCGGTCCCGC TGGTCGGCTT CGATCGTGGT
ACCTATGGCC TGCTGACGAC ACAATTACAG ACTGCCACCA TCGACAGCGT CGCGATCAAT
CTCGAGGACC GGCTGAAGCT GACGGACAGC TTCGCGCTGG TCGGCGGCCT GCGCTACAAT
CCGTTCACGC TCGACCGCAA CTGGATCCGG AATGGCGCCG AGCGGCCGGG CTTCCCCTAT
TCCAAGAGCT GGCAGCCGGT CACCGGCCGC ATCGGCTATA CGTGGGAAGC GCTGCCGGGG
ACGACCTTCT ACAGCCAATA TGCGACCGCG AGCGACATCT CGGCCGACAG CATCTTCCTG
CTCAGCCCGA CGCAGAACCT TACGCTGTCG GACTCCCGCA GCTACGAGAC CGGCGTCAAG
CAGCTCGTGT GGAACGGCCG CGCAGAGTGG ACCTTCTCGG CGTTCGACAT CGAGCGCAAC
AATGTCTACA GCGCCCAGGC CGGCCAGCAG CTCAACCTCG CCGGCAAGGT GAAGTCCCAG
GGCATCGAGC TGGCCGCCGC CGTGCGGCCG ACGACGGAGA CCAGGCTCTG GGGCAACGTC
GCCTATGTGC GCGCACGCTA CGCCGACTAC GATCTTGCCA ATGGCGGCTC GTTCTCCGGC
AACACGCCGC CGAACATTCC GGCTGTCATC GTCAATGGCG GCGGCTCCTA CCGCTTCCTC
AATCCGGGCT GGTGGCCGGT CGAACTCGGT TTCTCCGTGC GCCATGTCGG CGACCGCTGG
AGCACCGATG CCAACACGGT GAAGCTGCTC GCCTATACCA CGGCCGACCT GTTCGCCTTC
ATCGACCTGC CGAAGGTGCC GCTGTTCGCC ACCGCGACCA GCACGCGCCT CGCCTTCCGC
GTCCGCAACG TCACCGACAA GCGCTATGCG GCCTGGAGCG ATCCGTTCTA TCCCGACCAG
ATCTTCCTCG GCGCGCCCCG CACCTACGAG GTCGAAGCCT CGTTCAAGTT CTAG
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| Protein sequence | MSARDVWGSI SLAGLVAAGW APAPMAHAQQ AANSSGKPAA ETVLPGVTVD APRPRPVDGR
APSARPTSAQ TARSAPRRPP ASSPAAALSS ATTGPTATTP LNGNATPASG SRLGLTAREI
PATVEVIGAE TLRERGYHTT VDAVKGATGV SAGDAPNDVG FAMRGFQGNQ INVLYNGINI
GPTGFTALTM ETFNLDRVEF LKGPSSLSSG QGAVGGTINF VTKAPHTGPV ESETFIGFDQ
RGTFRSGFGS GGSTTVRGLD YRFDISRTRE VGFIDDTEFK NVHVSGQLNY RLSDSFRTFV
AAEFKDYKAK PYEGTPLVPV AFSGANATSG IVSGTKVSDY NGTNLGAVTI DGRTLSTNYN
VIDGHKTIKE SWVRSGFEWD LNNAVTLRSQ IYNYNASRDW YNNEVSAFNA GTNLVDRERF
FVHHNHNIVG NVTDVTWNGS IFGLSNRMVA SVESSHTDFT RPGAANFPGE SVPLVGFDRG
TYGLLTTQLQ TATIDSVAIN LEDRLKLTDS FALVGGLRYN PFTLDRNWIR NGAERPGFPY
SKSWQPVTGR IGYTWEALPG TTFYSQYATA SDISADSIFL LSPTQNLTLS DSRSYETGVK
QLVWNGRAEW TFSAFDIERN NVYSAQAGQQ LNLAGKVKSQ GIELAAAVRP TTETRLWGNV
AYVRARYADY DLANGGSFSG NTPPNIPAVI VNGGGSYRFL NPGWWPVELG FSVRHVGDRW
STDANTVKLL AYTTADLFAF IDLPKVPLFA TATSTRLAFR VRNVTDKRYA AWSDPFYPDQ
IFLGAPRTYE VEASFKF
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