Gene BBta_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3389 
Symbol 
ID5154885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3542781 
End bp3543173 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID640558247 
Productputative thioredoxin (H-type,TRX-H) 
Protein accessionYP_001239394 
Protein GI148254809 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.233221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC GACGTTTGAT GATAGTGGGT CTCGTATCCG CCATGGCTCT GGTAGCGGGC 
CCTGTGCGAG CCTTCGATGC GAAGGCGTTT GATGCAAAGG CATTCGAGGC TGCGCAGAAG
GAGGGCAAGC CGATCCTGGT CGAGGTCACG GCCCCCTGGT GTCCGACCTG CAAGGCGCAG
GCGCCGATCC TGTCCAATCT GGCAAAGGAC CCGAAGTTCA AGAACGTCGT CGCGTTCCAG
ATCGACTTCG ATTCGCAGAA GGATCTGCTG CGCAAGTTCG ATGTCCGGAT GCAGAGCACG
CTCATTTCGT TCAAGGGCGC AAGCGAGGTC GGACGGTCCA CGGGTGATAC CAACCCGGCA
TCGATCGAAG CCCTCGTGGC GAAGTCGATC TAG
 
Protein sequence
MIDRRLMIVG LVSAMALVAG PVRAFDAKAF DAKAFEAAQK EGKPILVEVT APWCPTCKAQ 
APILSNLAKD PKFKNVVAFQ IDFDSQKDLL RKFDVRMQST LISFKGASEV GRSTGDTNPA
SIEALVAKSI