| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3362 |
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| Symbol | |
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| ID | 5154833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3518690 |
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| End bp | 3521131 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640558221 |
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| Product | tonB-dependent receptor family protein |
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| Protein accession | YP_001239368 |
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| Protein GI | 148254783 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0573796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.429192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAGT CGTTCACCGG CCGGCTGCTG GGGGTGGTTG TGCGTGATCT TCGTTGCTCG
GTTTCTGCGT TGAGCTTGTC GGTCGCGCTC GGCTCATGCT TGCTTCTGAC GGTTGATGCC
GCTGCACAAA CATCTTCCCC GCCGGCCTCA GCAACAAGGA CGCCATCCGA GCTCCCACAG
GTCGATGTGA CGGCGCCAAA GCCGCGGAGC TCTGCCGCCG CTCGCTCGTC CGAGACCCAG
AAGCGGCAAT CCACCCGTTC GAATACGCGC CGGCCCGTTG CCGCTCCTGC GGCTGCAGTC
GCAGATCGTC AAGGACAGGG AGATCAGCGC GGAGTTGCAA CGCCGCTGAA CTCCAGCGGC
GTCGCCGCGA GCGCCAGCCG GCTCGGGCTG ACGCCGCGCG AAACGCCTGC AAGCGTCGAG
GTCGTCGGCG CCGACACCAT TCGCGAGCAG GGCTATCATA CGACGGTCGA CACCGTGAAA
GGTGCCACGG GCGTGACTGC GGGAGATGCG CCGAACGATG TCGCCTACGC CATGCGCGGC
TTCCAGGGCA ATCAGATCAA CGTCACCTAT AACGGCATCA ATATCGGTCC GACGGGATTC
ACGGCGTTGA CGATGGAGAC CTTCAACCTC GACCGGGTTG AATTCCTCAA AGGGCCGTCA
TCGCTGGTCT CGGGCCAGGG CGCCGTCGGC GGGGCCATCA ACTTCGTGAC CAAGGCGCCG
CACACCGGGC CGATCACGCA GGAGGCGTTC TTCGGCTTTG ACAACCGAGG CAGCATTCGG
AGCGGCTATG GCTCCGGCGG CAGCACCAAG ATCGACGGCC TCGACTATCG CTTCGACATC
AGCAAGTCCA GGGAGGTCGG CTTCATCGAC GATACCGACA CCAAGAATCT GCACGTGTCC
GGACAGCTGA ATTATCGTCT CACCGACACA TTCAAGGTGT TTGCGGCCAC TGAATTCAAG
GATTATCAGG CAAAGCTCTA TGAGGGCACA CCGCTTGTGA CGTCTGCCTA CAGCGGCGCG
TTCGCCACGT CGGGGATCGT ATCTGGCAAC AAGATTTCAG ACTACAACCT CAGCGCGCTC
AACAATGTCA CGATCGACAG CCGGACATTG TCGACCAATT ACAACGTTTT GGATGGTCAC
AAGACCATCA AGGAATCCTG GGTCCGCGGC GGCTTCGAAT GGGCCGCGAC GAACGACGTC
ACGGTGAGGA GCCAGTTCTA CAACTACAAT GCCAGCCGCG ACTGGTACAA CAACGAGGTG
ATCGCGTTCA ACGCCAACAC GAACCAGGTC GATCGCGAAC GCTTCTATGT CCATCACAAC
CAGAACATGG TCGGCAACAA TACCGACGTG ACCTGGAATT CGAATATCCT CGGCATGGAC
AATCGGATGG TGACGGGCTT TGAGGTCTAT CACCTGGATT TCGCCAGGCC TGGGGCGGCG
TCGATCGCTC CTCCCGATCA GGTCTCGCTC GTCGATCCCG TACGTGGCTA CTACGGCACG
CTGCAAACGC AGCGGCAGAC AGCGATCATC GACAGCTTCG CGATCAACCT GGAAGACCGG
CTGAAGATCA CCAATAATTT CGCGCTGATC GGCGGACTGC GCTACAATCC GTTCACGTTG
GATCGCACGT CGGTTGACAA GTTCGGTGCA ACGAAGAGCG GCTTTCCGTA TTCGGCGACC
TGGGATCCGG TGACGGGACG GATCGGCTAC ACCTGGGAGG CCGTTCCTGG TCTGACATTC
TATAGCCAAT ATGCGACGGC GAGCGATTTG TCGGTCGGCA GCCTGTTCCT GTTGAGCCCG
ACACAGAAGC TGACCCTGAC TTCCGCGCGC AGCTACGAGA CGGGCGTCAA GAACCTGCTG
TGGGACGGAC GCGCCGAATG GACGCTGTCG CTGTTCGACA TCGAACGGAG CAACGTCTAC
TCGGCGCAGG CGGGGCAGCG CCTCAATCTT GCAGGTAAGG TCAAATCGCA GGGCGTTGAA
CTGTCGGGGG CGGTGCGCCC GACCCCGGAG ACCAAGGTCT GGGCGAATGT CGCCTATGTC
AACGCCCGTT ATGCCGACTA TGACTTCACA GGTGGCACCT ACTCGGGCAA CACACCGCCG
AACATTCCGT CGCTGGTGGT CAATGGCGGG GCGTCCTATC GCTTCCTCAA TCCAGGCTGG
CTGCCGGTCG AACTCGGTTT CTCGGTCCGC CATGTCGGCG ACCGCTTCAC GACGGATGCC
AACGTGGTCA TGATGCGGGC CTATACGACC GCCGATGTGT TTGCTTTCGT AGACATCCCG
AAATCACGGC TCTTGCCGAC AGTCGACAAC ACGCGCGTGA CGTTTCGCGT CCGCAACGTG
ACCGACAAGA AGTACGCGGT CTGGAGCGAT CCGAATTACC CCGATCAGAT TTTCCTCGGA
GCGCCTCGTA CTTACGAGAT CGAGACCTCG TTCAAATTCT AA
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| Protein sequence | MGQSFTGRLL GVVVRDLRCS VSALSLSVAL GSCLLLTVDA AAQTSSPPAS ATRTPSELPQ
VDVTAPKPRS SAAARSSETQ KRQSTRSNTR RPVAAPAAAV ADRQGQGDQR GVATPLNSSG
VAASASRLGL TPRETPASVE VVGADTIREQ GYHTTVDTVK GATGVTAGDA PNDVAYAMRG
FQGNQINVTY NGINIGPTGF TALTMETFNL DRVEFLKGPS SLVSGQGAVG GAINFVTKAP
HTGPITQEAF FGFDNRGSIR SGYGSGGSTK IDGLDYRFDI SKSREVGFID DTDTKNLHVS
GQLNYRLTDT FKVFAATEFK DYQAKLYEGT PLVTSAYSGA FATSGIVSGN KISDYNLSAL
NNVTIDSRTL STNYNVLDGH KTIKESWVRG GFEWAATNDV TVRSQFYNYN ASRDWYNNEV
IAFNANTNQV DRERFYVHHN QNMVGNNTDV TWNSNILGMD NRMVTGFEVY HLDFARPGAA
SIAPPDQVSL VDPVRGYYGT LQTQRQTAII DSFAINLEDR LKITNNFALI GGLRYNPFTL
DRTSVDKFGA TKSGFPYSAT WDPVTGRIGY TWEAVPGLTF YSQYATASDL SVGSLFLLSP
TQKLTLTSAR SYETGVKNLL WDGRAEWTLS LFDIERSNVY SAQAGQRLNL AGKVKSQGVE
LSGAVRPTPE TKVWANVAYV NARYADYDFT GGTYSGNTPP NIPSLVVNGG ASYRFLNPGW
LPVELGFSVR HVGDRFTTDA NVVMMRAYTT ADVFAFVDIP KSRLLPTVDN TRVTFRVRNV
TDKKYAVWSD PNYPDQIFLG APRTYEIETS FKF
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