Gene BBta_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3361 
Symbol 
ID5155338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3517807 
End bp3518526 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content61% 
IMG OID640558220 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001239367 
Protein GI148254782 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.836865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.481905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAG CATCGATGCT CGACGCGATC GACGTGACGA AGCAATTCGG TGACAAGACC 
GCCCTGGACG GCGTAACGCT CAGCGTTTCG CCCGGTGATA TCTATTGCCT GCTCGGGGCC
AATGGTGCGG GCAAGACCAC GCTGATCAAT CTTTTCCTGA ACTTCATCCA ACCGTCATCA
GGACGTCTCA CGATCGGCAG CCTCGATGTC GCGCAATCTC CGCTCGAGAC CAAGCGCCTG
CTGGCCTACA TCCCCGAGCA GGTGACCCTC TATGCGACGC TGACGGGTGT CGAGAACCTC
GCCTTCTTCT CGTCGCTCGC GACTGGCGAT CGCTTGCCAC GGTCGGAGTT GCTTGTTTTG
CTTCAAGCCG CTGGACTGCC CCGCCAGTCC GTCGACGACC GTGTCTCGAC CTATTCCAAG
GGCATGCGCC AGAAGGTCGG CATCGCGATT GCGCTCGCCA AGCAGGCCAA GGCCCTGCTT
CTCGACGAGC CGACCTCCGG CCTCGATCCG TCCGCGGCCA ACGAATTCTC GGAGCTGCTG
ATCAATGCGA GCAGGTCGGG AGTCGCGGTG CTGACCACCA CACACGATCT CTTCCATGCC
AAGCAGACGG GCACACGCAT CGGCATCATG AAGCGCGGAC GCCTCGTCGA GGAGCTCAAG
AGCGAGGACG TCAGTCACGC CGACCTCGAA GCACTCTATC TCAAGCACAT GAAGAACTGA
 
Protein sequence
MERASMLDAI DVTKQFGDKT ALDGVTLSVS PGDIYCLLGA NGAGKTTLIN LFLNFIQPSS 
GRLTIGSLDV AQSPLETKRL LAYIPEQVTL YATLTGVENL AFFSSLATGD RLPRSELLVL
LQAAGLPRQS VDDRVSTYSK GMRQKVGIAI ALAKQAKALL LDEPTSGLDP SAANEFSELL
INASRSGVAV LTTTHDLFHA KQTGTRIGIM KRGRLVEELK SEDVSHADLE ALYLKHMKN