Gene BBta_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3352 
Symbol 
ID5153939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3508055 
End bp3508999 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content64% 
IMG OID640558212 
Productalpha/beta superfamily hydrolase 
Protein accessionYP_001239359 
Protein GI148254774 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0154019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.941858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGG GGACGATCGC GATGCCGTAT GTCGATGCCG GCGGGGTCAA GCTCTATGTC 
GAGGAAACCG GCCAGGGCCG TCCGATCATC TTTGCTCACG AGTTCGGCTC CGATCTGCGG
AGCTGGGATG GTCAAGTCCG TCACTTCGCG AAAAGCCACC GCTGCATCGT CTATAACGCA
CGGGGCTACC CGCCCAGCGA TGTTCCCGAG GATGCCGCGC TGTACGGCTG GGAGCATGCG
GTCGGCGACA TCGATGCGGT GATGCGCGGA CTTGGGATCG ACCGGGCTCA TCTGGTCGGG
GCCAGCATGG GCGCCTATGC CGCTCTGCAG TTCGGACTGC GATACCCAGG ACGGGTCAGC
GCCATCGTTG CCGCAGCCGC GGGATCGGGC TGTTCGCCGT CGCAGCGCGA GCAATGGCTG
AAGCAGACAT CAACGCTGGC TCGGTCGTTC ATCGATCGCG GTCTGGATGT GACGGCGAAC
AGGATCGCGC ACAGTCCGAC GCGCATTCAG CTCAAGCACA AGAATCCCCG GGCGTGGCGG
GAGTTCGCGG ACCGGCTCGG GCGGTTGTCC GCACGGGGAC TGTCGACGAC CATGGTCCGC
TATCAGATGT TGCGTCCGTC GCTGCACGAC TTCAGGGCCA GCTTGGCGGC ATTGGCGATC
CCGGTGTTGC TCGCTGTCGG TGACGAGGAC ACGCGTTGTC TCGACACCAA CCTGATGCTG
AAGGCATGCC TGCCCGATGC CGGCCTTTGG ATCTGTCCGA ACACGGGCCA CACCATCAAT
CTGGAAGAGC CTGCCGCCTT CAACGCGCAA GTTGAGGGCT TCTTCGATGC CGTCGAACGC
GGCTGCTGGC GTCGTGGATA TTCCACATCC AAACAGCGTC CCCGAAATCT CGACGCCGAG
CAGGCAGGCC CACCGATCTC CTTGGCCCAG CGCCGAATGC GGTGA
 
Protein sequence
MQRGTIAMPY VDAGGVKLYV EETGQGRPII FAHEFGSDLR SWDGQVRHFA KSHRCIVYNA 
RGYPPSDVPE DAALYGWEHA VGDIDAVMRG LGIDRAHLVG ASMGAYAALQ FGLRYPGRVS
AIVAAAAGSG CSPSQREQWL KQTSTLARSF IDRGLDVTAN RIAHSPTRIQ LKHKNPRAWR
EFADRLGRLS ARGLSTTMVR YQMLRPSLHD FRASLAALAI PVLLAVGDED TRCLDTNLML
KACLPDAGLW ICPNTGHTIN LEEPAAFNAQ VEGFFDAVER GCWRRGYSTS KQRPRNLDAE
QAGPPISLAQ RRMR