Gene BBta_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3340 
Symbol 
ID5154469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand- 
Start bp3499493 
End bp3500155 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID640558200 
Producthypothetical protein 
Protein accessionYP_001239347 
Protein GI148254762 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.417582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAACC TCTACAGCAT CACCACCAAC CAGGCCGCAA TCGCGGCACT GTTTCGGGTC 
GTCCGCCGAT ATGAAGGTAA TCTTCCTCCG ATGCCCGGTG TCTTCCCGGA CTACCCGGCA 
CCCGTCATTC GCGGCAACGA AGAAGACCGC GAGATGCTGA TGATGCGCTG GGGGATGCCG 
CCGCCTCCAC GGACCGGCGG GCCACCCGTG ACGAACATCC GCAACACCTC GTCTCCGCAT 
TGGCGGGGCT GGCTGAAGCC CGAGAACCGA TGCCTGGTGC CCTTCAACAG CTTTGCGGAA 
TACGCGCCAG AACCGAACCC AGAGACCAAG AAGAAGGATG TGGTCTGGTT CGCCTCGTCT 
GACGATCGCC CGCTGACCTG CTTCGCCGGC ATCTGGACTG AATTCCAGGG CGAACGCGGA 
ACAAAGTCCA AGCCGATCCC GGGCCCGCAC TTGGTCTACG GCTTCCTGAC AACCGAGCCG 
AACGCCATTG TTGCTCCCAT CCATCCGAAG GCGATGCCGG TCATCCTGAC GACGGATGAA 
GAGCGAGAGG TTTGGCTGCG CGCACCATGG AATGAGGCCA AAGCGCTCCA GCGTGCACTT 
GAAGATGATG TCCTCAAGAT CGTCGCGCGC GGTCCGGCAA AGGAAGACAT AGCAGCAGCC 
TGA
 
Protein sequence
MCNLYSITTN QAAIAALFRV VRRYEGNLPP MPGVFPDYPA PVIRGNEEDR EMLMMRWGMP 
PPPRTGGPPV TNIRNTSSPH WRGWLKPENR CLVPFNSFAE YAPEPNPETK KKDVVWFASS 
DDRPLTCFAG IWTEFQGERG TKSKPIPGPH LVYGFLTTEP NAIVAPIHPK AMPVILTTDE 
EREVWLRAPW NEAKALQRAL EDDVLKIVAR GPAKEDIAAA