Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3314 |
Symbol | |
ID | 5153910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3471996 |
End bp | 3473960 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640558175 |
Product | hypothetical protein |
Protein accession | YP_001239322 |
Protein GI | 148254737 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.949501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCATTTGA AATGGTTTCA TGTTCGCGAT TTCCAGAGTG TCCGCGACTC CGGCCGCATT ACCGTCTCCG ACATCACATG TCTGGTGGGG AAGAACGAAG CGGGCAAAAG TGCACTACTA AAGGCTCTTT ATCGGCTCAA TCCTGTCATC CCAGCCGACG GAAGCTTTGA CGTAACCAAC GATTATCCGC GAATGGAGGT CGAAGACTAC CGGCACGACG TCGAAACCGG CAAGCGAGCA GTCGCTCAAC CGATCGAGGC TTGCTACGAA TTGGACGCAG ACGAGATCTC GGCTATTGCC GATGTCTTCG GTCCGGATTG CGTCTCAACT CCAATGATCA GCTTTGTCAA GAACTATGAA AACGCAATTG CATACAAATT CACAGTCGAC GATCGAAAAG GTTTCGAACA TCTTATCAGC AAAGCGGACC TTTCCGCTCA GACCAGAGCC GCTTTAAAGG GCGTTGAGCT AACGCCCGAC GCCCTCACCC CGGTTCTGCA ATCGCAGGAG CAAACAGTAC AGGTCTCACA GCTTGTCACC ACGTTGGAGG ACATTAAGCA AAACGGCCTG ATGGGGCACA TCTATAATCG TTTGCTTTCG TCCCGCCAGC CCAAGTTTTT GTACTTTGAC GAATACTACC AGATGACGGG GCACGAGAAT ATCGACGCCC TGATCAACCG TGAAAACAGC AACCAGCTGA AACCGTCAGA TCATCCGCTG CTCGGCCTCA TTCGGCTCGC ACGCTTAAAG TTGCCCGAGC TCATCAATCC GGCGAGCACC ATAGAGCTCA AAAATAAGCT TGAAGGCGCC AGCAACCATT TGAGCCGGCA AGTTTTGAAA TATTGGTCGC AGAACAAGCA CCTCCGTATG TCGTTCGACG TACGGCCGGC GCGGCCTGGC GACCCGCCCG GCATGCAGCA AGGCACCAAT ATATGGGGCG GCGTGTTCGA CAGTCGCCAC CAGGTCACGA CAGAGCTGGG AAGCCGCTCG CGAGGCTTTG TGTGGTTCTT CTCCTTCCTG GCCTGGTACT CGGACGTCAA GAAAGGCGCC GAGCCTATGA TCCTACTGCT GGACGAACCT GGGCTGACGC TTCACGCCAA AGCGCAGCAC GATCTTCTGA GATATTTCGA GACGGAGCTA AAGGGTTCTC ACCAGCTCAT CTATTCTACG CATTCGCCGT TCATGGTCGA CCCCGAGCAT TTTGACCGGG TCCGCATCGT GCAGGACAAG AGTATCGATG CCGAACAGGA CGCCGATATC GGGGCGGAAG GGACAACCGT CCTGGAAGAT ATTTTTGCAG CCAATCCCGA CAGCCTTTTT CCCCTCCAGG GTGCGCTTGG CTACGAGCTG CACCAGACCT TGTTCATCGG CCCCTATACT GTGGTAGTTG AAGGAGCCGC CGATCTGCTC TTTCTGCAGG CTGTGTCTTC GATACTGCAG GAAGAAAAGC GGACCGGGCT GGATCCTCGT TGGACAATAA CGCCGGTCGG CGGCTCTGCA AAAGTCCCGA CATTTGTGGC CTTGCTGGGC TCTCAAAAAG GAATGACGAT TGCCACGCTA ATTGATAGCC AGGTCGCCGA TCAGAAGAAG ATCGAGGGAT TGTATCGAGA AAAACTGTTG AAGAAAGCCA ACGTGATGAC TTTTGCGGAC TTCACGAAGA CGGCGGAGGC AGATATCGAA GATATGCTCG GCGCAGCGTT CTATGTTGAC CTGGTCAACG CTGAGTTCGA GGCCCAGCTT TCGGCGCCAA TTGATATCAA CGCCCTGAAT TCCAAGGAAC CGAGAATACT GCAGCGGGTC GAAAAGTACC TCGTTGAGCA TCCCCTGAAG AATGGAACTT TCAGTCACTA CCGCCCCGCC CGGTACTTCA GCGAAAGCTC AAAGAAGCTA GGCAAGAAGT TGCCCAGCGA GGCCAAAAGC AACTTTGAGG CTGCATTCCA GGCGCTAAAT GCACTTCTTA AATAG
|
Protein sequence | MHLKWFHVRD FQSVRDSGRI TVSDITCLVG KNEAGKSALL KALYRLNPVI PADGSFDVTN DYPRMEVEDY RHDVETGKRA VAQPIEACYE LDADEISAIA DVFGPDCVST PMISFVKNYE NAIAYKFTVD DRKGFEHLIS KADLSAQTRA ALKGVELTPD ALTPVLQSQE QTVQVSQLVT TLEDIKQNGL MGHIYNRLLS SRQPKFLYFD EYYQMTGHEN IDALINRENS NQLKPSDHPL LGLIRLARLK LPELINPAST IELKNKLEGA SNHLSRQVLK YWSQNKHLRM SFDVRPARPG DPPGMQQGTN IWGGVFDSRH QVTTELGSRS RGFVWFFSFL AWYSDVKKGA EPMILLLDEP GLTLHAKAQH DLLRYFETEL KGSHQLIYST HSPFMVDPEH FDRVRIVQDK SIDAEQDADI GAEGTTVLED IFAANPDSLF PLQGALGYEL HQTLFIGPYT VVVEGAADLL FLQAVSSILQ EEKRTGLDPR WTITPVGGSA KVPTFVALLG SQKGMTIATL IDSQVADQKK IEGLYREKLL KKANVMTFAD FTKTAEADIE DMLGAAFYVD LVNAEFEAQL SAPIDINALN SKEPRILQRV EKYLVEHPLK NGTFSHYRPA RYFSESSKKL GKKLPSEAKS NFEAAFQALN ALLK
|
| |