| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3268 |
|---|
| Symbol | |
|---|
| ID | 5153845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3423397 |
|---|
| End bp | 3424245 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640558132 |
|---|
| Product | transketolase subunit A |
|---|
| Protein accession | YP_001239279 |
|---|
| Protein GI | 148254694 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3959] Transketolase, N-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.586745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCG CAACTCATCG GCTCGTCAAC GCGCCGACTT TGGCGCAGCG CGCCCACAAT
ATCCGCCGCC ATGCGCTGCG CATGGGCGAG GTGCAGGGGC AGGGTTATAT CGCGCAGGCG
CTCGACATCT CCGACGTGCT GGCAACGGCC TATTTCCACG CAATGCGCTA TCGGCCCGAA
GATCCCAATT GGGAGGAGCG GGACCGTTTC CTGCTGTCCA ACGGCCATTA CGCGATCGCG
CTCTACGCCG CGCTGATCGA GGCCGGCATC GTTCCCGAGG CCGAGCTCGA AACCTATGGC
AGCGACGACA GCCGGCTGCC GATGTCCGGC ATGGCGTCCT ACACGCCCGG CATGGAGATG
TCAGGTGGCT CGCTGGGTCT TGGGCTCAGC ATCGCCGTCG GCATGGGGCT CGGCCTGAAG
CGCAAAAACT CGACCTCACG CGTCTACACC CTGTTTTCCG ACGGTGAGCT CGACGAAGGC
TCGGTGTGGG AGGCGATCTC GTCCGCCAGC CACTACAAGC TCGACAACCT GATTGCGATC
GTCGACGTCA ACAATCAGCA GGCCGACGGG CCCTCGACCC AGGTCATGGG TTTCGAGCCG
CTCGTCGATC GGCTGCAGGC ATTCGGCTGG TTCGTGCAGC GCGTCAACGG CAATGACCTC
GATGCCGTGG TCGCCGCTTT CGACGCCGCG AAGACCCACG AGGCGCCGAG GCCGCGTATG
ATCGTGGCCG ACACGCTGAT GGGCAAGGGC GTGCCGTTCC TGGAACAGCG CGAGAAGAAC
CATTTCATTC GCGTCGAGCC GCATGAGTGG CAGCTCGCGA TCGCCGCACT CGACGCCGGG
AGGCCGTGA
|
|---|
| Protein sequence | MDTATHRLVN APTLAQRAHN IRRHALRMGE VQGQGYIAQA LDISDVLATA YFHAMRYRPE
DPNWEERDRF LLSNGHYAIA LYAALIEAGI VPEAELETYG SDDSRLPMSG MASYTPGMEM
SGGSLGLGLS IAVGMGLGLK RKNSTSRVYT LFSDGELDEG SVWEAISSAS HYKLDNLIAI
VDVNNQQADG PSTQVMGFEP LVDRLQAFGW FVQRVNGNDL DAVVAAFDAA KTHEAPRPRM
IVADTLMGKG VPFLEQREKN HFIRVEPHEW QLAIAALDAG RP
|
|---|
| |