Gene BBta_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3259 
Symbol 
ID5153812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3414690 
End bp3415193 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content63% 
IMG OID640558124 
ProductMarR family transcriptional regulator 
Protein accessionYP_001239271 
Protein GI148254686 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0457343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACTTA AGGAGGCCCC GCCTGTTGCG TCCAGGACCG GCACCGATCA GGAGGCCGAG 
CACAGGGCAC AGACACGGCT ATGGTTGCGG CTGCTCGCCT GCACGACGCT GATCGAGGGA
GAGTTGAGGC GTCGATTCCG CGAGGAATTC GATTTCACCA TGCCGCGCTT CGACGTGCTG
GCTCAGCTCG ATCGCGAACC CAGCGGGCTC GTTCTGGGCG AATTGCCCAA GCGCTTGATG
GTCTCTGCCG GCAACCTCAC CCCGATCGTC GACCGTCTGG TCGAGGATGG CTACATCACC
CGCACGCCTT CGAACCTGGA TCGGCGCGTC CAGATCATAT GCATGACGGT CGAGGGCCGC
AAAGCATTCA GGCGCATGGC GAAGCGGCAC GGTGCATGGC TCGCCGAGCT GCTGGCGCAA
TTTCCGCCGG AACGGCTCGA CGGGCTGACC TTGGAGCTTG ATGATCTGAA GGGAGCCGTC
AAGCAAGCGA CACGAAAGCC TTAG
 
Protein sequence
MALKEAPPVA SRTGTDQEAE HRAQTRLWLR LLACTTLIEG ELRRRFREEF DFTMPRFDVL 
AQLDREPSGL VLGELPKRLM VSAGNLTPIV DRLVEDGYIT RTPSNLDRRV QIICMTVEGR
KAFRRMAKRH GAWLAELLAQ FPPERLDGLT LELDDLKGAV KQATRKP