| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3257 |
|---|
| Symbol | |
|---|
| ID | 5153205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3411794 |
|---|
| End bp | 3412948 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640558122 |
|---|
| Product | putative branched-chain amino acid transport system substrate-binding protein |
|---|
| Protein accession | YP_001239269 |
|---|
| Protein GI | 148254684 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATCA AGAGCTGGTT GACTTCTTTT GCTGTGCTGC TCGGCCTTTC ACAGGCCGCG
CAGGCGGACA TCCTTGTCGG CTTCGTCACC GGCCTCAGCG GGCCGGTGTC ATCGATCGGG
ATTCCGAACG CCAAGGGGAT CGCTGCCGGC CAGGCCTATG TCGGAGAGAT CGGCGGTGAG
AAGGTCCGCG TCATTCAGCT CGACGACGGG TCCGACCCGA CGGCCTCCAC GCGCAATGCC
CGCAAGCTTG CCGAGCAGGA CAAGGTCGAC ATCCTGATCG GGACCTCGGG AGCCCCGCAG
ACGCTGGCGA TGGCGACGGC CGCGATCGAG ATGAAGGTGC CCATGATCGC GGTGTCTCCG
ATCGCCCCGG TGCCGTCCGG CGACGGCGGG CCGTGGGTCG TTCAGACGCC GCAGCCGACG
CCATTGCTGG TGCAAGGCAT CGTTGATCAT ATGAAGGCGC GCGGGCTGAA GAGCGTCGCT
TTCATCGGCT TCTCCGACGC GTTCGGCGAC CTCATGTACG AGTCATTGTC CGCCAGCGCG
AAGGCGGCCG ACATCAAGGT CGTCGCCAAT GAGCGCTACG CGCGCTCCGA CTCGTCCGTC
ACAGCGCAGC TGTTGCGCGC GCTCGCGGCA CGGCCGGATG CCATCATGCT GGGCGGGACG
GGAACCCCCG GCGCGCTGCC GGTCATTGGC TTGTCCGAGC GCGGCTACAA GGGGCCGCTC
TACGGCAATC ACGGACTGAT CAGCGCCGAT TTTCTGCGGC TGGCCGGCAA GGCGGCGAAC
GGCATCATCT GTCCGACCGG ACCGGTCACG GCGGCCGAGC AGCTTGCGGC AGGCAATCCC
ATTCGAGAGG TGGCCTTGGC CTTCCGCGCG GCCTTCGCCA AGGCCAATGG CGAAGCGCCG
ACCGATTCAT TTTCGTCCTA TTCGTTCGAC GGCTGGCTGG TGTTCGTCGA CGCTGCGAAG
CGCGCGTTGG CGACGGGTGC GAAGCCTGGA TCGCCGGAAT TCCGCTCCGC TCTCCGCGAA
GCGCTGTTCA CCACCAAGGA TGTCGTCGGG ACCCAGGGCG TCTACACCTT CACGCCGGCC
GATCGGCATG GTGTCGATGC GCGAGCGCGC ATCATGGTCC AGATCGAAGA CGGTCACTAC
AAATTGCTGC CATGA
|
|---|
| Protein sequence | MLIKSWLTSF AVLLGLSQAA QADILVGFVT GLSGPVSSIG IPNAKGIAAG QAYVGEIGGE
KVRVIQLDDG SDPTASTRNA RKLAEQDKVD ILIGTSGAPQ TLAMATAAIE MKVPMIAVSP
IAPVPSGDGG PWVVQTPQPT PLLVQGIVDH MKARGLKSVA FIGFSDAFGD LMYESLSASA
KAADIKVVAN ERYARSDSSV TAQLLRALAA RPDAIMLGGT GTPGALPVIG LSERGYKGPL
YGNHGLISAD FLRLAGKAAN GIICPTGPVT AAEQLAAGNP IREVALAFRA AFAKANGEAP
TDSFSSYSFD GWLVFVDAAK RALATGAKPG SPEFRSALRE ALFTTKDVVG TQGVYTFTPA
DRHGVDARAR IMVQIEDGHY KLLP
|
|---|
| |