| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3250 |
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| Symbol | |
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| ID | 5152696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 3405491 |
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| End bp | 3406627 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640558116 |
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| Product | putative branched-chain amino acid ABC transporter, substrate-binding protein |
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| Protein accession | YP_001239263 |
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| Protein GI | 148254678 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.202781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.281786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATAC TCGCGCTTGT CGCCGGCGTC TTTGCGGCAA CAGCTGCTCA GGCCGACATC
ACCATTGGTT TCGTCACATC GCTGAGCGGC CCCGGCGCCT CGATCGGCAT TCCGTATGGC
CGCGGCATCG CGGCGGCGTA TGAATACAAG AAGGTGATCA ATGGCGAGAC CATTCGTCTG
ATCCAGCTGG ACGATGGATC CGACCCATCC GCCGCAACCC GCAATGCGCG CAAGCTCGTG
GAAGAGGAGA AGGTCGACCT CCTGATCGGC ACGGCCACGG CTCCCTCGAC CATCGCGATG
GCCGCCGTCG CCAGCGAATT GAAGGTGCCG ATGATCGCGG TGTCGCCGAT CGGCAAGCTG
CCGGAATCGC CGGAGCAATG GGTCGTCTCG GTCCCACAAC CCGCATCCTT GCTGGTCAAG
ATCGTCGCCG ACCGCATGAA GCGCGATGGC ATGAAGAACA TCGGCTATAT CGGCTTCTCC
GACGCCTGGG GCGATCTCGT CTATAACGGC GCAAAGGCGG CCGAAGCCAC CGATGACATC
AAGGTGCAGA CCAACGAGCG TTATGCTCGG ACGGACACGT CGGTGACGGC GCAAACGCTG
AAGGTGCTCG CGGCCCGGCC GGATGCCGTC CTCGACGGCG GCTCGGGCAC GCAGGGTGCG
CTGCCTCTCC TGAGCTTGGC CGAGCGGGGT TTCAAGGGCA AGACGTATGG CACGGTCGCC
CTGGTCAATC CGGATTTCGT CCATGTCGGC GGCAAAGCCG CCGAAGGGAT CCAGGTGTCG
GCCGGCCCGG TGATCGTGGC CGAGCAGCTC CCGGACGATC ATTTCGCCAA GAAGCTCGCG
TTGGATTTCC GCGCGGTCTA CCAGAAGACC CATAATATTC CGACGACGGA CGGCTTCTCC
GCCTATTCGT TCGACGCCTG GCTCATCTTC GCCAACGCCG CCGAACAGGC ACTCAAAACC
ACAAAGCCCG GCACCAGCGC ATTCCGCGGC GCCCTGCGCG ACGCCATTCT CAGCACCCGG
GAACTGCCCG GCGTCCACGC CATCTACAAT TTCAAGCCGG GAGCGGTCAC GGGCGTGGAC
GAACGATCTC TCGTCATCGT TCGCCTGACC GATGGCGCGT GGAAGTATGC GCCATAA
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| Protein sequence | MSILALVAGV FAATAAQADI TIGFVTSLSG PGASIGIPYG RGIAAAYEYK KVINGETIRL
IQLDDGSDPS AATRNARKLV EEEKVDLLIG TATAPSTIAM AAVASELKVP MIAVSPIGKL
PESPEQWVVS VPQPASLLVK IVADRMKRDG MKNIGYIGFS DAWGDLVYNG AKAAEATDDI
KVQTNERYAR TDTSVTAQTL KVLAARPDAV LDGGSGTQGA LPLLSLAERG FKGKTYGTVA
LVNPDFVHVG GKAAEGIQVS AGPVIVAEQL PDDHFAKKLA LDFRAVYQKT HNIPTTDGFS
AYSFDAWLIF ANAAEQALKT TKPGTSAFRG ALRDAILSTR ELPGVHAIYN FKPGAVTGVD
ERSLVIVRLT DGAWKYAP
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