Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3248 |
Symbol | |
ID | 5152335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 3402639 |
End bp | 3404408 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640558114 |
Product | branched chain amino acid ABC tranpsorter permease/ATP-binding protein |
Protein accession | YP_001239261 |
Protein GI | 148254676 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.425684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTC TTCACGTCCA GCTGGCGGCA ATGGTGGCGA TGCTGTGCCT TGCTGCCGCG CCCTTCCTCC TGCCCCCGTT CACGATCACG CTGATGAACT ATATCGGCGT GTATTCGCTG GTCGCGATCG GCCTCGCGCT TCTCACCGGC GTCGGCGGCA TCGTCTCGTT CGGACAGGCG GCTTTCGTCG GGATCGCGGC CTATGCCACC GCCTGGGTGT CGGCCCTCAA CGGACAATCC CCCTGGGTCG GCCTCCTCCT GGCGTTGACG CTGACCTGCA GCATCGCGAC CCTGCTCGGG CTCGCCACCC TTCGGCTGCA GGGGCATTTC CTTTCGCTCA GCACGGTGGC ATGGGGGCTC GCGATCGGCT TCCTGTTCGG CAATGTGGAA GGGCTCGGAC GCTTCAACGG CATCGCATCG ATTCCGCCGA TCAGCTTCGG GTCCTATGCC CTGGTCTCCA GCGCGCAGGT CTATTTCCTG ATCTGGGGCA TCGTCGCAGC CGTTCTCTGG ATCGGATATA ATCTGCTGGA CTCGCGCCTC GGCCGCGCGA TGCGCGCGTT GCGGGGCGGC AATACGCTGG TCGAGAGCCT CGGCATCAGT GCGTTCCGGA TCAAGCTGCT GATCTTCGTC ATCGCGGCGT TTCTGGCGGC CCTGTCCGGC TGGCTCTACG CCCATATGAG CCGTTTCATC AGTCCCGGCC CATTCGATGC CGGCATGGGC ATCGAATACC TCATGATGTC GATGGTCGGC GGCGCAGGAA GTCTGCTTGG GGGCGTCGTC GGCGCCGCGA TCGTGACGCT GCTCAAGAAC AGCGTCCAGG ACTATCTGCC ATTGATCGCC AAGGGGGCAT CCGGCCAGCT TGAGATCGTC GCCTTCTCCG CGCTGTTCAT CCTGTTCCTG CAATGGGCCC GGCAGGGAAT CGTGCCATTC GTCGGGCGCT ATCTGCCGAA GCTGCGTCGC GACCGGCCGC AACCCGCCCC TGCCCTGCCG CGCCGTGCAC AGCCTGCGCC TGGAGAGCTG CTGCTCAAAG TGGACGGTGC CGAGCGACGT TTCGGCGGCC TTGTCGCCGT GAACAATGTG AGCTTCGACG TGCGCTCCGG GGAGATCCTG GCCGTGATCG GGCCGAACGG CGCCGGCAAG AGCACCATGT TCAACTGTCT GACGGGCGCG CTCCGCGTCA ACAAGGGCGA CATCGTCTTT GCTGGACGCT CGATCACCCG TGAGGCGCAA TCGCGGATCG CCAAGGCGGG CATCGCCAGA ACGTTTCAGC ACGTCAAGCT CAGGCCGCGG ATGAGCCTGC TCGAAAACGT GATGCTCGGC ACCTATGCTC GGACCCGCAC CGGCCTGCTC GCGAGCGCCT TGCGCCTCAA CCGGCGCGAG GAGGCCAGTG CGCAGTTCGA AGCGCTGCGT CAGTTGGAGC GCGTCGGGCT CGGCGACAAG CCGTTCGACA TCGCCGGCAA CCTGCCGCTC GGCAACCAAC GCATCCTGGA GATCGCGCGG GCCCTCGCCG CGGACCCGGC GCTGCTGGTG CTCGACGAAC CGGCTGCCGG ACTTCGCCGC CAGGAGAAGC TGCGGCTGGC CGAACTGCTC AGGTCGTTGC GGAATGACCA CCTGACCATC CTGATCGTCG AGCACGATAT GGAGTTCGTG ATGTCCTTGG TCGATCGCAT CGTCGTGCTC GATTTCGGAT CCAAGCTCTG CGAAGGCGAC CCCGCCGCGA TCCGGAACGA CGAGCGGGTT CAAGAAGCCT ATCTCGGAGG CGTCGCGTGA
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Protein sequence | MTRLHVQLAA MVAMLCLAAA PFLLPPFTIT LMNYIGVYSL VAIGLALLTG VGGIVSFGQA AFVGIAAYAT AWVSALNGQS PWVGLLLALT LTCSIATLLG LATLRLQGHF LSLSTVAWGL AIGFLFGNVE GLGRFNGIAS IPPISFGSYA LVSSAQVYFL IWGIVAAVLW IGYNLLDSRL GRAMRALRGG NTLVESLGIS AFRIKLLIFV IAAFLAALSG WLYAHMSRFI SPGPFDAGMG IEYLMMSMVG GAGSLLGGVV GAAIVTLLKN SVQDYLPLIA KGASGQLEIV AFSALFILFL QWARQGIVPF VGRYLPKLRR DRPQPAPALP RRAQPAPGEL LLKVDGAERR FGGLVAVNNV SFDVRSGEIL AVIGPNGAGK STMFNCLTGA LRVNKGDIVF AGRSITREAQ SRIAKAGIAR TFQHVKLRPR MSLLENVMLG TYARTRTGLL ASALRLNRRE EASAQFEALR QLERVGLGDK PFDIAGNLPL GNQRILEIAR ALAADPALLV LDEPAAGLRR QEKLRLAELL RSLRNDHLTI LIVEHDMEFV MSLVDRIVVL DFGSKLCEGD PAAIRNDERV QEAYLGGVA
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