Gene BBta_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3223 
Symbol 
ID5152818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3375226 
End bp3376500 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content71% 
IMG OID640558089 
Productputative carbohydrate kinase 
Protein accessionYP_001239236 
Protein GI148254651 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.71023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.569351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGC TATTTGTCGG CATCGATGTG GGCACCAGCG GCGTGCGCGC CTGCGCTGTC 
GATGCGCGCG GCGACATTGA GGGCGCGGCA GCGATGGCGC TCGCCGCGCC CCGCCAAAGC
GGCAATGCGC TGGATCAGGA CCCTGAGCTG TGGTGGCAGG CTGCGACCGC CGCGATCAGC
AAGCTCGGCG AGATCATCGA TCTCGGCGCG GTCGCCCGCA TCGCGATCGA CGGCACCTCC
GGCACGCTGC TGCTGATCGA TGCGGACGGA CGCCCCCGCT CGCCCGGATT GATGTACAAT
GATGCGCGCG CGACCCACGA AGCCAAACGC ATTGCCGCTG TCGCACCGCC CGAGAGCGGC
GCGCATGGCG CGAGCAGCGC GCTCGCCAAG CTCCTGCATC TTATGGCCTC GACCAGCGGC
GCGCGTCACG CCGTGCATCA GGCCGATTGG ATCGCGGGGA GATTGGCCGG CCGCCACGGC
GTCAGCGACG AGAACAACGC GCTCAAGCTC GGCTACGATC CGGTCCGGCG CTGTTGGCCG
CAATGGCTCG ACCAGCTCGG CATTCCGCCC GACCTGCTGC CGACCATTCT GGTGCCGGGC
ACGCCCTTTG CCGAGATCGA TCCGGCGGTC GCGCGCCGGC TCGGCCTGTC CTCTTCAGCG
CGGATCGTCG CCGGCACCAC CGACGGCGTC GCCGCGTTCA TCGCCACGGG CGCCGAGACG
CCAGGCGACG CCGTGACCTC GTTGGGCACC ACGCTCGTCG TCAAGCTGGT GGCGACGCAG
CCGATCTTCG CCGCCGATCA GGGCGTCTAC TCGCACCGGC TGGGCGACAA ATGGCTCGCG
GGCGGCGCGT CGAATTCCGG CGGTGCCGCG CTGCTGGCGC ATTTCTCCAC CGAGGACATG
GACCGCATGA CGCCGCTGCT GCGCCCGGAC GATCCGACCG GACTCGACTA CTATCCCCTG
CCCAAACCAG GCGAGCGCTT CCCGATCGCC GATCCCGCGC TGGCGCCACG GATCGCGCCG
CGGCCGGCGG AGGACCATCG CTTCTTCCAG GCGCTGCTCG AAGGCATCGC AGGGGTCGAA
GCGCTGGCCT ATCGTCGCCT CGAAGCGCTC GGCGCGCCGA CGCTGCGGCG CGTGATCAGC
ATCGGCGGCG GCGCCAGGAA TGCGGCCTGG GCGACGATCC GCGCGCGCAT CATCGGCGTG
CCCGTCAGCA TCGCCACGCA CACCGAAGCG AGCTACGGCA CGGCTCTGCT GGCGCTGCAG
GGGCCACCGC GATGA
 
Protein sequence
MTELFVGIDV GTSGVRACAV DARGDIEGAA AMALAAPRQS GNALDQDPEL WWQAATAAIS 
KLGEIIDLGA VARIAIDGTS GTLLLIDADG RPRSPGLMYN DARATHEAKR IAAVAPPESG
AHGASSALAK LLHLMASTSG ARHAVHQADW IAGRLAGRHG VSDENNALKL GYDPVRRCWP
QWLDQLGIPP DLLPTILVPG TPFAEIDPAV ARRLGLSSSA RIVAGTTDGV AAFIATGAET
PGDAVTSLGT TLVVKLVATQ PIFAADQGVY SHRLGDKWLA GGASNSGGAA LLAHFSTEDM
DRMTPLLRPD DPTGLDYYPL PKPGERFPIA DPALAPRIAP RPAEDHRFFQ ALLEGIAGVE
ALAYRRLEAL GAPTLRRVIS IGGGARNAAW ATIRARIIGV PVSIATHTEA SYGTALLALQ
GPPR