Gene BBta_3161 details

Gene Information

• Locus tag: BBta_3161
• ID: 5149812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 3312366
• End bp: 3312791
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640558029
• Product: putative flagellar protein fliS
• Protein accession: YP_001239182
• Protein GI: 148254597
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.359008
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.163853
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCAGA ATCCGATGGC ACATTTGGCC ACTCAGGCCT ATCGCGGCGC GGCCGTCACG 
GTTCCCCCGG TGCGCGCGGT CATCATGCTT CTCAACGGGA CGGTGACGTA CCTCCAAAAG 
TGTCTTCAGG CCCAGGAGGC ACGGCGTTTC GAGGAGGGGC ATGCACATCT GACCCGCGCC 
ACTGCGATCC TGCGCGGGTT GAGCCTGCAT CTGGACCCGA CCCGCGGCGG CGCGGTCGCA 
GAACGTCTGT TCGAGACCTA CAACGCGCTG ATCGTTGCGG CCCTGCGCGC CTACGGCCGG 
CCGGGGATGC GCGAGAACTT CCTGCGCATC ATGGCGGGGG TGACGGAGTT GCGCGAGTCC 
TGGGAGGCGG TTGACGTGAG GGCGCGGGTG GGATCGCGGG CAGGTGATTC GCCGAGGCGA 
GGGTGA 

 

Protein sequence

MTQNPMAHLA TQAYRGAAVT VPPVRAVIML LNGTVTYLQK CLQAQEARRF EEGHAHLTRA 
TAILRGLSLH LDPTRGGAVA ERLFETYNAL IVAALRAYGR PGMRENFLRI MAGVTELRES 
WEAVDVRARV GSRAGDSPRR G