| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3135 |
|---|
| Symbol | |
|---|
| ID | 5149820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3284903 |
|---|
| End bp | 3285622 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640558002 |
|---|
| Product | cobalamin-5'-phosphate synthase |
|---|
| Protein accession | YP_001239156 |
|---|
| Protein GI | 148254571 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.436841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGC GTGACTTCTG GATCGCATTG CAGTTCATGA CGCGTCTGCC GACGCCGCGC
GTCGTCGAGT CCCGGCCGGA CGATCTCGCA CGGGCATCGC CGTGGTTTCC GGCCGCAGGG
CTGGTGATCG GCGCGTGCCT GGCCCTGATC GCCCGGATTT TCCAAAGCGC CGATCCATGG
ATCGTCGCGC TGGCCGTGGT CGTCGCCTGG ATCTGGATCA CAGGCGCGCT GCATCTCGAC
GGTCTCGGCG ATGTCGCCGA CGCGTTCGGC GCCGCGCATG GCAAGCCCGA GCGCTTCATC
GCTGTGCTGG GCGATCCTCA TGCCGGCAGC TTCGCGGTGG TGGCCATCAG CCTGCAGATC
GCCGCCAAGC TGGTGCTGCT CGCCGAGCTG GCGACGGGGC CGACCGGCTG GGCGCTTCTG
CTGATCCCGG CCTGGGCGCG CCTGGGCACG TTGGTCTGGA GCAAGATGCT GGTGTCGTTG
AAGCCGGGGC TGGGTGCGAG CGTGTCGAAC CGCGCCGGCT GGAATGTCAT TGCTGGATGG
AGCGTCGTCC TGGCGATCGG CGCGCTTGCC GGCGCCGTCC CGAGCTTGCT TGCCATCGCA
CTCATCCCGG CCGTCGCAGT CTATTGGCAA TGGCGGCTCG GCGGCATCAC CGGCGACTGT
CACGGCGCCA GCATCGAGGT GACGGAGACG CTGCTGCTCG CCGCTTGCGT GCTGGGCTAG
|
|---|
| Protein sequence | MSLRDFWIAL QFMTRLPTPR VVESRPDDLA RASPWFPAAG LVIGACLALI ARIFQSADPW
IVALAVVVAW IWITGALHLD GLGDVADAFG AAHGKPERFI AVLGDPHAGS FAVVAISLQI
AAKLVLLAEL ATGPTGWALL LIPAWARLGT LVWSKMLVSL KPGLGASVSN RAGWNVIAGW
SVVLAIGALA GAVPSLLAIA LIPAVAVYWQ WRLGGITGDC HGASIEVTET LLLAACVLG
|
|---|
| |