Gene BBta_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3110 
Symbol 
ID5150245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3259130 
End bp3260965 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content62% 
IMG OID640557980 
Producthypothetical protein 
Protein accessionYP_001239134 
Protein GI148254549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.464764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAC GTCCGATCGT ACGAATCCTG CGCGAGCCCG CTCGACTAGG AAGAAAAAAG 
GGACGGCGAC CGCACTTCCC CAAGGCGATC TCCTCGGCCG ACCAGGCGAA GAGACACAAT
CATAAGTTCG AGGGTATCGA GAACGGCATC GCGAGTATCC TCGGCGGCGC CGATCTGAAG
GATTCGCCCG CGGAAGTCGC CCCCGACAGG GCGCTTGTCT TCGAGGTCAT CGGTCCCGTC
TCCACCGTTG CCAAGCTGAT CGAGGCCGCG CGAAGCGCAG GAATCGAATG GCTTGGCGAG
GATTACGATC TCTCCGATGG CGACGATGAT CACGGCGGCG CGGACGACGA CGCGGGCGAA
AAGGCTGGGC AGGGCGACGA AGACTCGGAC GACGCCCAGA GCATGCTTTA CGTCACCATG
CCGACCCTCA AGGGTCTGCA GAAGGTCGTC TCGCTATGGA AGCGCTTCAC CAAGGGCGAG
GAAAAGCCAC CCGGCGCCGA CGGCGAATGG TGGGCGTTGT TCAAGTATCT GAGCGACGTC
CGCCCTTGGT CCGCTAAGGA CAGGGTCGAT CCGTTCATGG AAGCCTACGT CGAGCGCATG
CTGCAGGATC GCCCGAACGA TCCGGTCAGA GTTGAAATCG ACCTGTGGTA TCGCTCGGAT
CCCGATCTGC GCGCGCAGGC CGGGACCTAT CTCCAAGCCC TGATGAACAC CGTCGACGGC
AAGGTCCTCG ACTTCGAGAC CATCGAGCCG ATCCACTATC AGGCCGCGCT CGTCGAGATC
TCCGCCGCCG AGGCGCTGAA GCTTAGGCAG ACCGAAGGCC CGATCGCCAA TGCCGATCGC
GTCATGAAGG TCCGCCCTCA GTCGCTCTAC AGATCGGATG GCGAACGTAC CGACGAAAAA
GACCCGCCTA CGGGCGCCCC GGAAGGCGAC GCCAACCCGT CACGCCCCGC GGTCGCGGCG
CTCTTGGACG GCTATCCCGT GCAGAACCAT GTCATGCTGG CCGGTCGCCT CGACATTCAG
GAAGTGGACA TCACCGCGGA CACCGTGCCG GTCGCCCGCC GGAAGCACGG CACCTCCATG
GCTTCGCTGA TCGTGCATGG CGATCTCGGC GAGCCGCAGA CCCCTATCGA TCGTCCGCTC
ACCGTCGTGC CCGTCCTCGC CGCGCCGCAA AACCTCAACT ACGAAACCAC ACCGCAGGAT
AAGTTGCCGA TGGCCATGGT CTACCGGGCC GTGACCGCGC TCATGGAAGG CATCGACGGC
AAACCCGCGC AAGGCGACGG GATCGTCATC ATCAATCATT CTGTCTGCGA CAGCGAAGCA
CCATATGCGC AAAGGCCGAC ATACTGGGCC AAGCTCCTCG ACTATCTCAG CCACGAGTAC
CGCCTGCTGT TCATCGTCAG CGCGGGCAAT TCCAACGAAC CATTCGCCAT CGATGGCTAC
GACGAAGTGG CCGACTTCAA CAATGCCGAT CCCGTCGAGC GCCAGATCGC GATCCTGAGA
AGCGTCGAAA ACGCTAAGGG CAAGCGGGCC ATTCTCAGTC CCGCAGAAAC GATGAACGGG
CTCACCGTCG GCGCAGTCCA CGGCGACAGC GCAGGCGCAT TCCCGCCTGG CATCATCGAT
CCCTACGATC CTGTGTCGGG TGTCACCAAC TTGGCATCAT CGTTCGGGCT CGGCATCAAC
CGCGCGATCA AGCCCGACCT GATCGAACTC GGTGGACGTC AACTCATCCG TGTAAACAAG
GACGATGAAG GGCTTTACGC CTCCGCCCAC GAACACTATT CCGTCGGACA ACTCACCGCC
ATCCCCGATA CCTCGGGTCT TGCCGACGAT AAATGA
 
Protein sequence
MAQRPIVRIL REPARLGRKK GRRPHFPKAI SSADQAKRHN HKFEGIENGI ASILGGADLK 
DSPAEVAPDR ALVFEVIGPV STVAKLIEAA RSAGIEWLGE DYDLSDGDDD HGGADDDAGE
KAGQGDEDSD DAQSMLYVTM PTLKGLQKVV SLWKRFTKGE EKPPGADGEW WALFKYLSDV
RPWSAKDRVD PFMEAYVERM LQDRPNDPVR VEIDLWYRSD PDLRAQAGTY LQALMNTVDG
KVLDFETIEP IHYQAALVEI SAAEALKLRQ TEGPIANADR VMKVRPQSLY RSDGERTDEK
DPPTGAPEGD ANPSRPAVAA LLDGYPVQNH VMLAGRLDIQ EVDITADTVP VARRKHGTSM
ASLIVHGDLG EPQTPIDRPL TVVPVLAAPQ NLNYETTPQD KLPMAMVYRA VTALMEGIDG
KPAQGDGIVI INHSVCDSEA PYAQRPTYWA KLLDYLSHEY RLLFIVSAGN SNEPFAIDGY
DEVADFNNAD PVERQIAILR SVENAKGKRA ILSPAETMNG LTVGAVHGDS AGAFPPGIID
PYDPVSGVTN LASSFGLGIN RAIKPDLIEL GGRQLIRVNK DDEGLYASAH EHYSVGQLTA
IPDTSGLADD K