Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3110 |
Symbol | |
ID | 5150245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3259130 |
End bp | 3260965 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640557980 |
Product | hypothetical protein |
Protein accession | YP_001239134 |
Protein GI | 148254549 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.464764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAC GTCCGATCGT ACGAATCCTG CGCGAGCCCG CTCGACTAGG AAGAAAAAAG GGACGGCGAC CGCACTTCCC CAAGGCGATC TCCTCGGCCG ACCAGGCGAA GAGACACAAT CATAAGTTCG AGGGTATCGA GAACGGCATC GCGAGTATCC TCGGCGGCGC CGATCTGAAG GATTCGCCCG CGGAAGTCGC CCCCGACAGG GCGCTTGTCT TCGAGGTCAT CGGTCCCGTC TCCACCGTTG CCAAGCTGAT CGAGGCCGCG CGAAGCGCAG GAATCGAATG GCTTGGCGAG GATTACGATC TCTCCGATGG CGACGATGAT CACGGCGGCG CGGACGACGA CGCGGGCGAA AAGGCTGGGC AGGGCGACGA AGACTCGGAC GACGCCCAGA GCATGCTTTA CGTCACCATG CCGACCCTCA AGGGTCTGCA GAAGGTCGTC TCGCTATGGA AGCGCTTCAC CAAGGGCGAG GAAAAGCCAC CCGGCGCCGA CGGCGAATGG TGGGCGTTGT TCAAGTATCT GAGCGACGTC CGCCCTTGGT CCGCTAAGGA CAGGGTCGAT CCGTTCATGG AAGCCTACGT CGAGCGCATG CTGCAGGATC GCCCGAACGA TCCGGTCAGA GTTGAAATCG ACCTGTGGTA TCGCTCGGAT CCCGATCTGC GCGCGCAGGC CGGGACCTAT CTCCAAGCCC TGATGAACAC CGTCGACGGC AAGGTCCTCG ACTTCGAGAC CATCGAGCCG ATCCACTATC AGGCCGCGCT CGTCGAGATC TCCGCCGCCG AGGCGCTGAA GCTTAGGCAG ACCGAAGGCC CGATCGCCAA TGCCGATCGC GTCATGAAGG TCCGCCCTCA GTCGCTCTAC AGATCGGATG GCGAACGTAC CGACGAAAAA GACCCGCCTA CGGGCGCCCC GGAAGGCGAC GCCAACCCGT CACGCCCCGC GGTCGCGGCG CTCTTGGACG GCTATCCCGT GCAGAACCAT GTCATGCTGG CCGGTCGCCT CGACATTCAG GAAGTGGACA TCACCGCGGA CACCGTGCCG GTCGCCCGCC GGAAGCACGG CACCTCCATG GCTTCGCTGA TCGTGCATGG CGATCTCGGC GAGCCGCAGA CCCCTATCGA TCGTCCGCTC ACCGTCGTGC CCGTCCTCGC CGCGCCGCAA AACCTCAACT ACGAAACCAC ACCGCAGGAT AAGTTGCCGA TGGCCATGGT CTACCGGGCC GTGACCGCGC TCATGGAAGG CATCGACGGC AAACCCGCGC AAGGCGACGG GATCGTCATC ATCAATCATT CTGTCTGCGA CAGCGAAGCA CCATATGCGC AAAGGCCGAC ATACTGGGCC AAGCTCCTCG ACTATCTCAG CCACGAGTAC CGCCTGCTGT TCATCGTCAG CGCGGGCAAT TCCAACGAAC CATTCGCCAT CGATGGCTAC GACGAAGTGG CCGACTTCAA CAATGCCGAT CCCGTCGAGC GCCAGATCGC GATCCTGAGA AGCGTCGAAA ACGCTAAGGG CAAGCGGGCC ATTCTCAGTC CCGCAGAAAC GATGAACGGG CTCACCGTCG GCGCAGTCCA CGGCGACAGC GCAGGCGCAT TCCCGCCTGG CATCATCGAT CCCTACGATC CTGTGTCGGG TGTCACCAAC TTGGCATCAT CGTTCGGGCT CGGCATCAAC CGCGCGATCA AGCCCGACCT GATCGAACTC GGTGGACGTC AACTCATCCG TGTAAACAAG GACGATGAAG GGCTTTACGC CTCCGCCCAC GAACACTATT CCGTCGGACA ACTCACCGCC ATCCCCGATA CCTCGGGTCT TGCCGACGAT AAATGA
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Protein sequence | MAQRPIVRIL REPARLGRKK GRRPHFPKAI SSADQAKRHN HKFEGIENGI ASILGGADLK DSPAEVAPDR ALVFEVIGPV STVAKLIEAA RSAGIEWLGE DYDLSDGDDD HGGADDDAGE KAGQGDEDSD DAQSMLYVTM PTLKGLQKVV SLWKRFTKGE EKPPGADGEW WALFKYLSDV RPWSAKDRVD PFMEAYVERM LQDRPNDPVR VEIDLWYRSD PDLRAQAGTY LQALMNTVDG KVLDFETIEP IHYQAALVEI SAAEALKLRQ TEGPIANADR VMKVRPQSLY RSDGERTDEK DPPTGAPEGD ANPSRPAVAA LLDGYPVQNH VMLAGRLDIQ EVDITADTVP VARRKHGTSM ASLIVHGDLG EPQTPIDRPL TVVPVLAAPQ NLNYETTPQD KLPMAMVYRA VTALMEGIDG KPAQGDGIVI INHSVCDSEA PYAQRPTYWA KLLDYLSHEY RLLFIVSAGN SNEPFAIDGY DEVADFNNAD PVERQIAILR SVENAKGKRA ILSPAETMNG LTVGAVHGDS AGAFPPGIID PYDPVSGVTN LASSFGLGIN RAIKPDLIEL GGRQLIRVNK DDEGLYASAH EHYSVGQLTA IPDTSGLADD K
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