| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3059 |
|---|
| Symbol | |
|---|
| ID | 5149440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 3194821 |
|---|
| End bp | 3196701 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640557930 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001239084 |
|---|
| Protein GI | 148254499 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3743] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.661615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGACC TTACGACGTT CTTATTCTGG ATCCTGCTCG CTGCGGTCAT CGGCGGCTTC
GTCGGCTGGT ACAGCTGGTC GGACGACAAG CGCCCGGACT GGCTGCGCAG CTGGCTGCTG
CCCGCCACTT TGGCCTTCGG GATCGGCGCC CTTCTGGCAT TGCTGAGCGT GCTGCCGGGG
CGCGCCGGGC TGTGGCTCGA GGTCGCGCTG CTAATGGTCA GCGCCTATGT GCTCGGCTGC
CTGAGCGGCG GACAGTTGAA GGAATATGTC GGGCTCGGCG ACAGCAGCGC AATGGCGCCG
GGAGGCCCCG GGACCAGCGC GGCGTTCACG GCGGCCCCAG CGCCGCCGGC ACGCCCGTGG
GCAGACAGCC CTTCGCCGGC CGTGCAAGCC GCAGCCAGTA TCGAGGCTGA TCGGCTGGCC
GCTGAAGCTG CCGTAAAGAC AGAGGCGGAT CGCCTGGCTG CTGAAGCTGC GGCAAAGGCC
GAGGCCGATC GCCTGGCTGC TGAAGCTGCG GCAAAGGCCG AGGCGGATCG CCTGGCCGCT
GAAGCTGCCG CAAAGGCAGA GGCCGATCGC CTGGCCGCTG AAGCTGCCGC AAAGGCAGAG
GCGGATCGAC TGGCTGCTGA AGCTGCGGCA AAGGCCGAGG CCGATCGACT GGCTGCTGAA
GCTGCGGCAA AGGCCGAGGC CGATCGACTG GCCGCGGAGG CTGCCGCAAA GGCTGAGGCG
GATCGTCTCG CTGCGGAGGC TGCCGCGAAG GCCAAGGCCG ATCGTCTGGC CGCTGAAGCT
GCCGCGAAGG CCGAGGCGGA TCGTCTCGCT GCGGAGGCTG CCGCGAAGGC CGAGGCCGAT
CGACTGGCCG CTGAAGCTGC GGCAAAGGCC GAGGCGGACC GACTGGCTGC TGAAGCTGCG
GCAAAGGCCG ACGCAGATCG ACTGGCCGCG GAGGCTGCCG CAAAGGCTGA GGAGGATCGT
CTCGCTGCGG AGGCTGCCGC GAAGGCCGAG GCAGATCGAC TGGCCGCTGA AGCTGCCGCA
AAGGCCGAGG CCGATCGCCT GGCCGCGGAA GCCGCCGCAG CAAAGGCTGA GGCGGATCGC
CTTGCCGCGG AGGCCGAAGC CGACCAGCTT GCGGCCGAAG TTGCGGCCTC AGCGCCGACC
ACCGTCACCG CCGACGACAG GCCACCGGCC CTGCCCGCCC CCGACGGCAC GGCTGACGAC
CTCAAGCTCA TCAAGGGCAT CGGCCCGAAG AACGAGCGCA TCCTCAACGA GATCGGCGTG
CATCATTTCA GCCAGATCGC GGCATGGTCG CCAGGCCAGG CGAGCTGGGT CGGCGATCAC
ATGGCGTTTC CCGGCCGCAT CGAGCGCGAG CACTGGATCG CTCAGGCGAA GCTGCTCGCG
GCCGGTCTCG ACACCGCGCA TTCGAGCGCG GTGAAATCAG GGGCCATCAC GATCGATGAT
ACGGCCGATG CGCCGCTGAG CGGCGACGAG GCCGACGCCC TCCTGGCGCA GCTGCCGGAT
TTGGCGCCCG CGGTCGAGAA CGAGGACGCC CATGCTGGTC GCCGGCCGCT CGGCCTGGCG
GCGCCTCGCG GCGGACAGGC TGATGATCTC AAGCTGATCA AGGGCATCGG CAAGCAGAAC
GAGGCGCGAC TGCACGGCCT GGGGATCTGG CACTTCGCGC AGATCGCGGC ATGGACCCCC
GACCACGCCA AATGGGTCGG CTCCTATCTC GCCTTCGCCG GCCGGATCGA GCGCGAGCAA
TGGATCGCGC AGGCCGAGGA GCTGGCCAGC GGCGGCACCA CCGAATTCGC CCGCCGCGTC
GAAGCAGGTC TGGTGAAGTC GTCGCTCGAC GACGGCTCGC ATGGCCAGGA CAATATCGAG
ATCGTGCAGC CGCGGGAGTG A
|
|---|
| Protein sequence | MYDLTTFLFW ILLAAVIGGF VGWYSWSDDK RPDWLRSWLL PATLAFGIGA LLALLSVLPG
RAGLWLEVAL LMVSAYVLGC LSGGQLKEYV GLGDSSAMAP GGPGTSAAFT AAPAPPARPW
ADSPSPAVQA AASIEADRLA AEAAVKTEAD RLAAEAAAKA EADRLAAEAA AKAEADRLAA
EAAAKAEADR LAAEAAAKAE ADRLAAEAAA KAEADRLAAE AAAKAEADRL AAEAAAKAEA
DRLAAEAAAK AKADRLAAEA AAKAEADRLA AEAAAKAEAD RLAAEAAAKA EADRLAAEAA
AKADADRLAA EAAAKAEEDR LAAEAAAKAE ADRLAAEAAA KAEADRLAAE AAAAKAEADR
LAAEAEADQL AAEVAASAPT TVTADDRPPA LPAPDGTADD LKLIKGIGPK NERILNEIGV
HHFSQIAAWS PGQASWVGDH MAFPGRIERE HWIAQAKLLA AGLDTAHSSA VKSGAITIDD
TADAPLSGDE ADALLAQLPD LAPAVENEDA HAGRRPLGLA APRGGQADDL KLIKGIGKQN
EARLHGLGIW HFAQIAAWTP DHAKWVGSYL AFAGRIEREQ WIAQAEELAS GGTTEFARRV
EAGLVKSSLD DGSHGQDNIE IVQPRE
|
|---|
| |