Gene BBta_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3013 
Symbol 
ID5152422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3149391 
End bp3150194 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content57% 
IMG OID640557887 
Producthypothetical protein 
Protein accessionYP_001239041 
Protein GI148254456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.337818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGGCC GGCGGCCAAG GCCGCCGCAG GATCCGGAGG CGGACTATCA TGATTTCCTG 
GTCGATCGGA TGAGCCGCGG CGGCTGGAGC AGCACACAGC TTCGATGCGT CGACAAGGAG
TTTGCAAAAC TTGAAGCGAG CAAGCTCCAT CCCGCAATCA AGGCTGCCGA AACGGTCGCG
GTCATCCCGA TCCGAGGCAT GAGCATCGAT CGCTTTACGG AGGCCATGGG ACCGCATCTG
GGACGGCATT TCGTCGCCAA ACCGACACAC GGTTCAGCAG CGACGGAATT TCTGGACGCC
CGCCCCGATC TCACGAAGCT CTATCGCGCC GGGCGCTACA ATTATTTCTA CAGTTTTCGC
GAAAGTCAGT ACGCGCCGCT GGAACGCAAA ATCATCATTG AAGAAAACAT CGCCGAACAC
GGTTCGGACC TGCGCGATTT CAAATTCTTC TGCAGCTTTG GACGCATTCT CTTCGTTCAG
GTCGACGCCA ATCGATTTAT CGAGCACGAG CGCATTCTGC TCTCACCTCC CGACTTCGAG
CCGCTCAACC TGACCTTGGG CGCTTTCAAG CCGACGACAA CATGGGTCAG ACCCAAACAG
TTTGAGGCGC TTTGTCACGC CGCACAGGAC CTGTCCCGAC CATTCGATTT TGTCAGAGTC
GATCTCTATG AAAAGGCAGG ACAGGTGTTC TTTGGCGAAT TCACCTTCAC CCCCGGAGCC
GGCATGGAGC CATTCTCTGA GCCGGGTTTC AGCAGACGCC TGCTCTCCGA GATCAAGGCG
CGTCCGGATT GTCCTGCACG GTGA
 
Protein sequence
MFGRRPRPPQ DPEADYHDFL VDRMSRGGWS STQLRCVDKE FAKLEASKLH PAIKAAETVA 
VIPIRGMSID RFTEAMGPHL GRHFVAKPTH GSAATEFLDA RPDLTKLYRA GRYNYFYSFR
ESQYAPLERK IIIEENIAEH GSDLRDFKFF CSFGRILFVQ VDANRFIEHE RILLSPPDFE
PLNLTLGAFK PTTTWVRPKQ FEALCHAAQD LSRPFDFVRV DLYEKAGQVF FGEFTFTPGA
GMEPFSEPGF SRRLLSEIKA RPDCPAR