Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3008 |
Symbol | |
ID | 5152640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3144173 |
End bp | 3144811 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640557882 |
Product | hypothetical protein |
Protein accession | YP_001239036 |
Protein GI | 148254451 |
COG category | [S] Function unknown |
COG ID | [COG4944] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.915712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCG ATCAGCTTAT CCGCTCGCTC GCGGCCGACA ATGCCCAACG GGCGCAGCCC GTGGGCATCG TGCTGGCGCT GGCGCTGATG GCGGCGACGC CGGTCTCGAC CGCGATGCTG CTCATCGGCC TCGGCATCCG GCCCGACATC TGGCTCGCGG TGCGCAATCC GTTCTTCGAT CTCAAATTCG TGGTGACCAC CGCGCTGGCT ATTCCGGCGC TTATCATCAG CCTGCATCTG TCGCGGCCCG AAGCGTCGCT CCATGGCTGG AGCTGGCTCC TGATCGCGCC GGTCCTGGTC CTCGTCGGCG GCATCGTGGC GGAGATGATG GTGCCGCAGC GCGCGCCGAT GATGGCGCGG CTGGTCGGCC ATAACTCGAT GCTGTGCGTC AGCGCGATTC CCGTCTTGTC GCTGCCGCTG CTGGCGGCCG CGCTGTTCGG GCTGCGCCAT GGCGCACCGT CGCGCCCGGC GTTGGCCGGT GCGATCGCCG GCCTGGTTTC GGCGGGACTG GCCGCGACGC TCTATGCCGC GCACTGCACC GACGATTCGC CGCTGTTTGT CGCCACCTGG TACACGATCG CGGCGCTGGT CGTGGCCGGC CTCGGCGCCG GGATCGGTGC GCGGGTGCTG CGTTATTGA
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Protein sequence | MDTDQLIRSL AADNAQRAQP VGIVLALALM AATPVSTAML LIGLGIRPDI WLAVRNPFFD LKFVVTTALA IPALIISLHL SRPEASLHGW SWLLIAPVLV LVGGIVAEMM VPQRAPMMAR LVGHNSMLCV SAIPVLSLPL LAAALFGLRH GAPSRPALAG AIAGLVSAGL AATLYAAHCT DDSPLFVATW YTIAALVVAG LGAGIGARVL RY
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