Gene BBta_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3008 
Symbol 
ID5152640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3144173 
End bp3144811 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID640557882 
Producthypothetical protein 
Protein accessionYP_001239036 
Protein GI148254451 
COG category[S] Function unknown 
COG ID[COG4944] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.915712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG ATCAGCTTAT CCGCTCGCTC GCGGCCGACA ATGCCCAACG GGCGCAGCCC 
GTGGGCATCG TGCTGGCGCT GGCGCTGATG GCGGCGACGC CGGTCTCGAC CGCGATGCTG
CTCATCGGCC TCGGCATCCG GCCCGACATC TGGCTCGCGG TGCGCAATCC GTTCTTCGAT
CTCAAATTCG TGGTGACCAC CGCGCTGGCT ATTCCGGCGC TTATCATCAG CCTGCATCTG
TCGCGGCCCG AAGCGTCGCT CCATGGCTGG AGCTGGCTCC TGATCGCGCC GGTCCTGGTC
CTCGTCGGCG GCATCGTGGC GGAGATGATG GTGCCGCAGC GCGCGCCGAT GATGGCGCGG
CTGGTCGGCC ATAACTCGAT GCTGTGCGTC AGCGCGATTC CCGTCTTGTC GCTGCCGCTG
CTGGCGGCCG CGCTGTTCGG GCTGCGCCAT GGCGCACCGT CGCGCCCGGC GTTGGCCGGT
GCGATCGCCG GCCTGGTTTC GGCGGGACTG GCCGCGACGC TCTATGCCGC GCACTGCACC
GACGATTCGC CGCTGTTTGT CGCCACCTGG TACACGATCG CGGCGCTGGT CGTGGCCGGC
CTCGGCGCCG GGATCGGTGC GCGGGTGCTG CGTTATTGA
 
Protein sequence
MDTDQLIRSL AADNAQRAQP VGIVLALALM AATPVSTAML LIGLGIRPDI WLAVRNPFFD 
LKFVVTTALA IPALIISLHL SRPEASLHGW SWLLIAPVLV LVGGIVAEMM VPQRAPMMAR
LVGHNSMLCV SAIPVLSLPL LAAALFGLRH GAPSRPALAG AIAGLVSAGL AATLYAAHCT
DDSPLFVATW YTIAALVVAG LGAGIGARVL RY