Gene BBta_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3002 
Symbol 
ID5152798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3138029 
End bp3139030 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID640557876 
Productsignal-transduction protein 
Protein accessionYP_001239030 
Protein GI148254445 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTG CCGTCGTATC GGTCTTCGCG GACACGCCGG TCCGCGAGAT TGCGAGGCTG 
CTCCTCGGCC AGGGCATCAG CGCGGTGCCC GTGGTCGATG CTGAAGGTTT GCCGCTCGGG
ATGGTCAGCG AAGGCGACCT GATGGGGCGA AACGATCTGG AGCGGGTGGC GGGCACAGAG
TGGTGGCTTC AGCTGCTGGC CGGGCAGGAG GAGGTGCATC GTGATTGGCC GGCCAGCGCG
CATGTCCTGG CGAGAACCGC CCGCGATGTC ATGTCGGCAC CGGTTGTTGC AGTCGGCGAA
GATACCAGCG TTCCCGAGAT CGCACGGCTC TTGACGGCCC ACCGGATCAA GCGCGTACCG
GTCGTCCGCG ACGGCCGCAT CGTCGGCATT GTCAGTCGCG CCAACCTTCT CGCCGTGCTG
TTGTCACAGG AGGAGACCGC GATGTCCCGG CACGAGAACG GGGTGCTATC ACGCGCCCTT
GCCAGTCTCG ACGGGCAGTT TCTGCATCGC CGCCGACCAG CCGAAGCCCC TGAGGCGCGG
CGTCCCGTCA GCCGATCGGA GGAGGAGCTC CCGCTGGCGG CGGACTTCCG GGATCTGGTG
GACGAATTCG AGCGCCATGA GGGGGAACAG CGCAATGCCC TTCGCGAGGC AGCCGCCGCA
CAGCGCCGGC AGCAGGTGAA GGACTTGATC GATCGGCATA TTTCCGACGA CAAATGGCGA
ACCCTGCTCC ACCTCGCGCG CGAAGCAGCG CATCGCGGCG AGAAACAGCT CATGCTGTTG
CGTTTTCCCA GCGGGCTCTG CATCGACGGT GGCCGCGCTG TCAACGTTGC CGAGCCGGGC
TGGAATGCGA CGTTACGCGG CGCAGCAGCA GAGATGTATC TGCGCTGGGA GCGGGATCTG
AAACCGCATG GCTTTCGGCT GACGGCGAGC GTGCTCGAAT TTCCCGATGG CCTCCCGGGC
GACATCGGGC TGTTTCTGAT CTGGGGAGAC ACGCAGGAGT GA
 
Protein sequence
MTTAVVSVFA DTPVREIARL LLGQGISAVP VVDAEGLPLG MVSEGDLMGR NDLERVAGTE 
WWLQLLAGQE EVHRDWPASA HVLARTARDV MSAPVVAVGE DTSVPEIARL LTAHRIKRVP
VVRDGRIVGI VSRANLLAVL LSQEETAMSR HENGVLSRAL ASLDGQFLHR RRPAEAPEAR
RPVSRSEEEL PLAADFRDLV DEFERHEGEQ RNALREAAAA QRRQQVKDLI DRHISDDKWR
TLLHLAREAA HRGEKQLMLL RFPSGLCIDG GRAVNVAEPG WNATLRGAAA EMYLRWERDL
KPHGFRLTAS VLEFPDGLPG DIGLFLIWGD TQE