Gene BBta_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2993 
Symbol 
ID5155889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3127782 
End bp3128942 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content65% 
IMG OID640557869 
Producthypothetical protein 
Protein accessionYP_001239023 
Protein GI148254438 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGC GTTTGCTGAC GACCTCGCTG GCGCTCGCCC TAGCAGCGAC CACGCTCTCC 
CCTGCTCTTG CCGTCGATCC GATCAAGATC GGCGTCCCCG TCGGCCTGTC CGGCGCCAAC
TCCGTCGTCG CGCCGTCGGT CGTGCAGTCC GCCGAGCTCG CGGTGGAGGA GATCAACGCC
AAGGGCGGCG TGCTCGGCCG CAAGCTCGAG CTCGAGGTTG CCGATGATGC GTCCGGCGCC
GCCGGCGCCC AGAAGGCGTT CGACGCGCTG ATCTTCCAGA AGAAGGTCAA CGTGCTGATC
TCGATGGAGA CCAGCGCGGC GCGCAACGCC GGCCTGCCGA TCGTCGCCCG CGGCAAGACG
CCCTACATCT ACACCTCGTT CTACGAAGGC AAGTCCTGCA GCCCCTATCT CTACGTCAAT
GCCTGGGTGC CGGACCAGCA GGTGCCGCCG ATCGTCGACT ACTTCAACAA GGAGAAGAAG
GCGAAGAGCT ACTTCCTGAT CGGTTCCGAC TACGCCTTCG GCCGCGGCAT GCTCGGCTTC
ACCAAGACGT ACATCGAGAA GACCGGCGGA AAGGTGGTCG GTGAAGAGTA TCTGCCGATG
GACGGCTCCG ACTGGACCTC GATCATCTCC AAGCTCAAGG CCTCCGGCGC GGATGCGCTG
ATCACCTCGA CCGCGGGCGG CGCGCCGAAT GTGACGCTGA CCAAGCAGTT GCGCGCCGCC
GGCGTGACCC TGCCTTACGG CAATCTCGCC GTCGACGAGG GCACCGCCAA GGGCATGGGC
GCGGATGCCG CTGGCATCTA CCTGTCGGCG TCCTACGTGA CCGGCATCGA CACGCCCGCC
AACAAGACCT TCCTGGCGTC GATGGCCAAG AAGTTCGGCG CCGAGCTGAA GACGCCGAAC
GATCTGTCTG TTCCGCAGTA CGAAGCGGTC TACGCCTACA AGGCTGCCGT CGAGAAGGCT
GGCAGCACCG ACCAGGACAA GGTTTTGAAG GCGCTGGCCG AGGTCTCGGT CGAGGGTCCG
CGCGGCACCA TCAAGATGGA CAAGCAGCGC CATGCGCCGC TGACCATGTA TCTCGGCCAG
GTCCAGGCCG ACGGCAGCGT GAAGGTCATC CAGAGCTTCA AGAACGTCGA TCCTGGCGCG
CAGTGCCCGG GCAAGTCCTG A
 
Protein sequence
MTSRLLTTSL ALALAATTLS PALAVDPIKI GVPVGLSGAN SVVAPSVVQS AELAVEEINA 
KGGVLGRKLE LEVADDASGA AGAQKAFDAL IFQKKVNVLI SMETSAARNA GLPIVARGKT
PYIYTSFYEG KSCSPYLYVN AWVPDQQVPP IVDYFNKEKK AKSYFLIGSD YAFGRGMLGF
TKTYIEKTGG KVVGEEYLPM DGSDWTSIIS KLKASGADAL ITSTAGGAPN VTLTKQLRAA
GVTLPYGNLA VDEGTAKGMG ADAAGIYLSA SYVTGIDTPA NKTFLASMAK KFGAELKTPN
DLSVPQYEAV YAYKAAVEKA GSTDQDKVLK ALAEVSVEGP RGTIKMDKQR HAPLTMYLGQ
VQADGSVKVI QSFKNVDPGA QCPGKS