| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2936 |
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| Symbol | alkB |
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| ID | 5155076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3054583 |
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| End bp | 3055236 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640557815 |
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| Product | DNA-N1-methyladenine dioxygenase |
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| Protein accession | YP_001238969 |
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| Protein GI | 148254384 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.443338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.900156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCTG ATCTGTTCGA TGGACTCGAG TCCGCAGGAC CGGCGCGCCA GCAGCTTGCG
CCGGGTGCCG TTCTGCTGCG CGGCTTTGCG CGGTCACAGC AGGCCGAGCT GATCGCGGTG
ATCGAGGCGA TCGCCGCTCA GGCGCCGTTC CGCCGCATGA TGACGCCGGG CGGCCATCAG
ATGTCGGTGG CGATGACGAG TTGCGGATCG TGTGGCTGGG TCACGGACCG GACCGGCTAT
CGCTACGATG CCCTTGATCC GGAGAGCGGC CAGCCATGGC CGGCGATACC GCCGTTGTTT
CGCGACCTTG CGGAGCAAGC CGCGAGCGAA GCCGGCTTTG CAGACTTCGC GCCGGATGCG
TGCCTGATCA ACCGCTATGA ACCCGGTGCC AAGATGTCGC TGCACCAGGA CCGCGACGAG
CGCGACATCG GCGCGCCGAT CGTCTCGGTG TCGTTGGGTC TGCCCGCGAC GTTCCTGTTC
GGTGGCCTCA AGCGCACCGA CAAGACGCAG CGTTATCGGC TCGTTCATGG CGACGTCGTC
GTGTGGGGCG GCCCGGCGCG GCTCGCCTTC CACGGCATAG CCCCGCTCGC CGACGGCGAG
CATGCGCTGC TCGGCCGCCG GCGCATCAAC CTGACATTTC GCCGGGCGCG CTGA
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| Protein sequence | MAADLFDGLE SAGPARQQLA PGAVLLRGFA RSQQAELIAV IEAIAAQAPF RRMMTPGGHQ
MSVAMTSCGS CGWVTDRTGY RYDALDPESG QPWPAIPPLF RDLAEQAASE AGFADFAPDA
CLINRYEPGA KMSLHQDRDE RDIGAPIVSV SLGLPATFLF GGLKRTDKTQ RYRLVHGDVV
VWGGPARLAF HGIAPLADGE HALLGRRRIN LTFRRAR
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