| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2934 |
|---|
| Symbol | |
|---|
| ID | 5153715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 3052395 |
|---|
| End bp | 3053747 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640557813 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001238967 |
|---|
| Protein GI | 148254382 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.721101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG CAAATCCGAC CCTGGCCGCG CTGGCTGCTG ATCTCGCCGC CGGCCGCATG
ACGTCGCGCC AACTGGTCGA GGCGTGTCTC GCGCGGATCG CTGACCCGGC CGGCGAAGGC
CAGCGCGCCT TCATCCATGT CGACAAGGCG GCGGCGCTGG CGGCCGCCGA CGGCATGGAT
GCGCTGCGCA AGGCCAATGC CGCGCCGTCG CCCTATGCCG GCATTCCCGT CTCGATCAAG
GACCTGTTCG ACATCAAGGG CCAGGTGACC CGCGCCGGCT CGCGCGCGCT GGAGGATTCG
GCGCCGGCGG ACGCCGATGC GCCGGTCGTG GCGCGGCTGC GCCGGGCCGG CTTCGTCGTG
ATCGGCCGCA CCAACATGAC CGAGTTCGCC TATTCCGGCA TCGGCATCAA CCCGCATTAC
GGCACGCCGA AGAGCGCCTG GAAGCGCGAA ATCGGCCACG TACCCGGCGG CTCGTCGTCG
GGCGCTGCGG TGTCCGTCGT CGACCGCATG GCCTATGGCG CGCTCGGCAC CGACACCGGC
GGCTCCTGCC GCATCCCCGC GGCCTTCAAC GGCATCACCG GCTTCAAGCC GACGCAGGCC
CGCGTGCCGC TCGACGGCGG CGTGCCGCTG TCGACCACGC TCGACAGCTT TGGTCCGCTC
GCCAACACGG TGGCCTGCTG TGCGGTGCTG GATTCCGTGC TGGCAGACGA GCCGATCCGG
CCGCTCGCGC CGCGCCCGGT GAAGGGCCTG CGGCTTGCGG TGCCCACCAC CGTCGTGCTC
GACGAGCTCG ACGTCGAGGT GGCGGAGACG TTCGAACGCG CGCTGGAGAC CTTGGCGAAG
CAGGGCGCGC TGATCGAGCG CATCGAATTC CCGGAATTCC TCGACGTCGG CCTCATCGGC
ATGAAGGGCG GCTTTGCCGC CGCCGAGAGC TATGCTTGGC ACCGCTTCCT GCTCACAGCC
AAGGGCGACG TCTATGATCC GCGCGTGTCG GTCCGCATCA TGCGCGGCGA GGCGATCACC
GTGCCCGACT ACATCGAGAT GCTCAACGCC CGACGCTCCC TGGTGGCGCG GGCGGCCGCG
CGCATCGCGC CCTATGACGC GTTGGTGATG CCGACCACGG CGAATGCGCC GCCGAAAATC
GCCGATCTCG CCGACGACCA GGCCTTCGCC CGCGAGAACA TCCGGGCCCT GCGCAATTGC
ACCTTCATCA ACATGATCGA CGGCTGCGCC ATCTCGCTGC CGGCGCATCG CCACGGCGAC
GTCCCGGTCG GCCTGATGCT GGCACAGTCC GGCGGCAATG ACCGCAAGCT GCTGGAGATC
GCCGCGGGGG TCGAGGGTGT GGTGCGGGGC TGA
|
|---|
| Protein sequence | MTTANPTLAA LAADLAAGRM TSRQLVEACL ARIADPAGEG QRAFIHVDKA AALAAADGMD
ALRKANAAPS PYAGIPVSIK DLFDIKGQVT RAGSRALEDS APADADAPVV ARLRRAGFVV
IGRTNMTEFA YSGIGINPHY GTPKSAWKRE IGHVPGGSSS GAAVSVVDRM AYGALGTDTG
GSCRIPAAFN GITGFKPTQA RVPLDGGVPL STTLDSFGPL ANTVACCAVL DSVLADEPIR
PLAPRPVKGL RLAVPTTVVL DELDVEVAET FERALETLAK QGALIERIEF PEFLDVGLIG
MKGGFAAAES YAWHRFLLTA KGDVYDPRVS VRIMRGEAIT VPDYIEMLNA RRSLVARAAA
RIAPYDALVM PTTANAPPKI ADLADDQAFA RENIRALRNC TFINMIDGCA ISLPAHRHGD
VPVGLMLAQS GGNDRKLLEI AAGVEGVVRG
|
|---|
| |