Gene BBta_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2712 
Symbol 
ID5152141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2806046 
End bp2807074 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content67% 
IMG OID640557604 
ProductLacI family transcription regulator 
Protein accessionYP_001238758 
Protein GI148254173 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC CGCTGACATT GCGGGACATC GCGCGGCAGG CGGGCGTCAG CCTCGCCACG 
GTCGATCGCG TGCTCCACAA CCGGCCGGGG GTACGACCGG ATACGGTTCA GCGCGTCAAG
GATGCGATGG CGCGGAGCGC GTTCCAGCCC CATGCGGCGG CGTCGGAGCT TGCAAGGGCT
CGCTCGCGGC GCTTTGCCTT TGTGATGCCG GCCGGCATCA ACCTGTTCAT GCAGCAGATC
GAGGCGCATC TCGGCGAGCT GGGGACCTGG ATGGCCGCAC GCCGGCTATC GGTCGATATC
GTCACCACCG ATGTGTTTGA TCCAGGCGTC CTGGCCGGCA AGCTTGAAGA TCTGGTTGGC
CGCGTCGATG GCGTCGCCGT GGTCGCGCTC GATCATCCGA GCGTGCGCGC CGCCATCAAC
GACCTTGTCG AGGCCGGCGC CAAGGTGGTG ACGCTGGTGT CGGATGTGCC CTCGTCGCGG
CGGCACCATT ATGTCGGGAT CGACAACATC GCCGCCGGCC GCAGCGCCGG CGCGCTGGTG
GGGCGCTTCG TCGGTGGCAG GACGGGACGG CTGGCGATCA TGGCGGGCTC GCAAGGCCTG
CGGGACCATG CCGAACGCAT CTTCGGCTTC ACCCAAGTCA TCGCTGCCGA GCATCGACAA
CTTGAGGTTT TGCCCGTGCT TGAGGGGCAT GATGAGGATG ATCGCTCAGA ACACCTCATG
GGCCAGCTGC TGGCCCGGCA TGGCGACATT GTCGGTCTGT ACAATGTCGG TGCCGGCACG
GCCGGCGTTG CCAAGGCGCT GACCGAGGCC GGCCGCGCCG GCAATATCGT GTTCGTCGGC
CATGACGTGA CCGCGGTGAC GCGCAAGCTG CTGCTGAACG GCGTGATGGA TGCGGTCATC
TCGCAGAACC CGGGGCACGA GGCGCGGTCG GCGGTGCGCG TGCTGCTGGC GTTGGCGCGG
GGCGAGCCGC TGCTGAGTGA ACAGGAAACG ATCCGCATCG ACATCGTGAT GCGGGACAAT
CTGCCCTGA
 
Protein sequence
MNAPLTLRDI ARQAGVSLAT VDRVLHNRPG VRPDTVQRVK DAMARSAFQP HAAASELARA 
RSRRFAFVMP AGINLFMQQI EAHLGELGTW MAARRLSVDI VTTDVFDPGV LAGKLEDLVG
RVDGVAVVAL DHPSVRAAIN DLVEAGAKVV TLVSDVPSSR RHHYVGIDNI AAGRSAGALV
GRFVGGRTGR LAIMAGSQGL RDHAERIFGF TQVIAAEHRQ LEVLPVLEGH DEDDRSEHLM
GQLLARHGDI VGLYNVGAGT AGVAKALTEA GRAGNIVFVG HDVTAVTRKL LLNGVMDAVI
SQNPGHEARS AVRVLLALAR GEPLLSEQET IRIDIVMRDN LP