Gene BBta_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2612 
Symbol 
ID5155064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2709739 
End bp2710908 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID640557511 
Productputative general secretion pathway protein F 
Protein accessionYP_001238665 
Protein GI148254080 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGGCA CGATCTCGGC GGCGACAGCC AAGGATGTGA TCGATCGCAT CGAGTATCTG 
CGGCTGCTCC CGATCGAGAC GGTGGAGGAG AAGACCGCGA GCCCTGTCAC CCGCGATATG
CTGGCTTGGT TCGGCGGTCC GACCCAGGCC GATGTCACGA CGTTCACGCG CGACCTGGCG
CTGCTGCTGA AGGCCGGTGC GCGGCTTGAG GACTCCCTCG AATTGCTGGC CGGCGACGCC
GACATCGGGC GGCTGCGTCC GATCGTCAAC CGTCTGCGAT CGAGCATTCT TGCCGGAGAA
AGTCTTGCCG ACGCGCTGGC GCATCATCCG TTACAGTTTC CCGCAATGTA CCTGGCGCTG
GTGCGGGTCG GCGAAGCCTC GGGAAGTCTC GATCACGTGC TCGAGGTCCT CGGCGCAGAG
CGGGCGCGCG CGGACGCAAT GCGGCGCAAG CTCAGCGATG CGATGCAGTA CCCGCTGTTC
GTGCTGGCCG CCGCCGCGCT GGTGATGCTG TTCTTCTTCC TGGTCGTGCT GCCCCAGTTC
TCGGCCGTGC TGCGCGATTT CGGTGCCAAG ACTGACACGA CCATTACGAC GTTTCTCGAC
ATCTCCGATT TCGTGCGCGG CCATGGCGCC GCGCTTGCAT CGGCGGCGGC CGCGATTGTC
GCTGCGGGTG GTCTGCTGTT CGGCCGGGCC GGTGTCCGTG CCGCCCTGAT CGCACAGCTC
TGCCGCTTGC CGGGCCTCGC GAAAGTATTC GGGTCGTATC GTACGAGCGT GTTCTGCCGC
AATCTGGCGA TCCTGCTCGG CAGCGGCCTG ACCTTGACCG CGACCTTGCG TATCCTGGTC
GACATCATGT CGGCCATCGG CAATGGCGCG GAATGGGGCG CCGCGGCCGA CCGCGTGCGT
CACGGCGGCA AGCTGTCGGA GGCGCTGGCG GCGACGAGCA TCCTGCCGGC CATGGCGACG
CGGATGATCC GGATCGGTGA GGAGACCGGG CAGGTGCCGG TCCTGGCTGG CCGCATCGCC
GAATTCTATG AGGCGAAGCT GCAGCGCAGC CTCGATCGCA TCGTTGGCAT TGTCGGTCCT
GCGGCCATCA TTCTCATCAG CACCGTCGTG GGTGGCCTCA TCGTGTCGGT GATGTCCGCG
CTGCTGTCGG TCACCCAACT CGTGGGCTAA
 
Protein sequence
MHGTISAATA KDVIDRIEYL RLLPIETVEE KTASPVTRDM LAWFGGPTQA DVTTFTRDLA 
LLLKAGARLE DSLELLAGDA DIGRLRPIVN RLRSSILAGE SLADALAHHP LQFPAMYLAL
VRVGEASGSL DHVLEVLGAE RARADAMRRK LSDAMQYPLF VLAAAALVML FFFLVVLPQF
SAVLRDFGAK TDTTITTFLD ISDFVRGHGA ALASAAAAIV AAGGLLFGRA GVRAALIAQL
CRLPGLAKVF GSYRTSVFCR NLAILLGSGL TLTATLRILV DIMSAIGNGA EWGAAADRVR
HGGKLSEALA ATSILPAMAT RMIRIGEETG QVPVLAGRIA EFYEAKLQRS LDRIVGIVGP
AAIILISTVV GGLIVSVMSA LLSVTQLVG