Gene BBta_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2588 
Symbol 
ID5154332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2680460 
End bp2681629 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content64% 
IMG OID640557493 
Productputative luciferase-like monooxygenase 
Protein accessionYP_001238647 
Protein GI148254062 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.139273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTG CGGTTCAAAA GGACGCCGGA CCGGTTCTGC GCGGGCCGCT GGATTTTCCA 
GACAGCCCGC TGTCGCGCGC GGCGCGCCAG CCGCTGATGC TCGGGCTGTT CCTGAACCTG
CAGGACATCC GGCTCTCGAC CTTTCCATCC AGCTCGACCT GGACCTACGA CTACAACGCC
GAGATCGTGC GCAAGGCCGA CGAATTGGGA TTCGAGATTG CGTTCAGCCG CACGCAATGG
CTGCCCAAGG GTGGATATGA CGGAGAGGCG TCGCTCGACA GTTTCGTGGC GCTCGGCGCG
ATGGCGGGCA GCACCCGGAA CATTCTCCTG ATCTCGACCT TGCATGTGCT CTACGGGCCC
TGGCATCCGC TGCATATCGC CAAGATCGGC GCCACCTTCG ACCACATCTC GAAAGGCCGC
TGGGGCATCA ACATCGTCAC CGGGCACCGC GCGATCGAAC ACGAGATGTT CGGCTGGGAT
CGGATCGAGC ACGATCGGCG CTACGAGATG ACGGGCGAGC TGTTCGACGT GCTGCACCGG
CTGTGGACCG ACACCGAGAA CTATTCCTAC GACGGCAAGC TGTCACCTTG GAAGATCAAG
GACGGCTACA TCACGCCGAA ACCGCTCTAT GGCCGGCCGG TGCTGGTGAC TGCGACGGGG
TCGCCGGCCG GCATCGATTT CGCCGCGCAG CATTCCGACC TGCTGTTCAT CACGTCGCCG
GGCGGCGCTC ATATCGACAG CGCCCTGGAG ACGCTGCCCG ATCATATCGC TGGCATCAAG
GCACGCGCCC GTGCGCGCGG CCGCGAGGTC AAGACGATCA TCAATCCGAT CATCATCAGC
CGCGATACTG AGGCCGAGAC TGCGGCCTAT CTGAAGGGCA TCGTCGACAA CAAGATTCCC
TCGACCTTCG GCAGTTCGTC GCGCAACGCC TATGACAGCG ACGCCGTGGC CTGGAAGGGA
CGCGGTGATC CGCGGCACAA GCAGGGTCTG GGCCTGGGCG GCAACATCGA GATCATCGGC
ACGCCCGAAC AGGTCGTCGA CAAGCTGGCC GGGCTGAAGA GGGCCGGCAT CGATGGCGTG
CAGCTCAACT TCTACGACTT CGCGCCGGAC TTCGATCATT TCGCACAGAC GACGCTGCCG
CTGCTCCGCC ACGCGGGGCT CAGGCTCTGA
 
Protein sequence
MSIAVQKDAG PVLRGPLDFP DSPLSRAARQ PLMLGLFLNL QDIRLSTFPS SSTWTYDYNA 
EIVRKADELG FEIAFSRTQW LPKGGYDGEA SLDSFVALGA MAGSTRNILL ISTLHVLYGP
WHPLHIAKIG ATFDHISKGR WGINIVTGHR AIEHEMFGWD RIEHDRRYEM TGELFDVLHR
LWTDTENYSY DGKLSPWKIK DGYITPKPLY GRPVLVTATG SPAGIDFAAQ HSDLLFITSP
GGAHIDSALE TLPDHIAGIK ARARARGREV KTIINPIIIS RDTEAETAAY LKGIVDNKIP
STFGSSSRNA YDSDAVAWKG RGDPRHKQGL GLGGNIEIIG TPEQVVDKLA GLKRAGIDGV
QLNFYDFAPD FDHFAQTTLP LLRHAGLRL