Gene BBta_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2560 
Symbol 
ID5153819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2646588 
End bp2647313 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID640557468 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001238622 
Protein GI148254037 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.390131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGC ATCTCAAGGC GGTTCACGTC CATCTGGGAT CGGCCCACAT CCTTCACGGC 
ATCGATCTCG ACGTGCGCCC GGGCGAGATC GTCTGCCTGC TCGGCCGCAA CGGCGTCGGC
AAGAGCACGA CGTTGCGCAC GATCATGGGG CTGGTGGCGC CGAGCCAGGG TGAGCTGTCG
TTCGAGGGCC AGCGGATCGC GGGGCTGCCG CCGCATCGGG TCTGCGCGCG CGGCATTGCC
TGGGTGCCCG AGGACCGCCG CGTCTTCGCC TCCCTCACGG TCGAGGAGAA CATCCGCGTC
GCAGCCGAGA TCACAGGTCC CCGTTCGGCA CAAGCGCGGG CCGAGGCGGC GATCGCGCCG
TTTCCGGATC TGCGCGGCAA GCTGAAGCAG CGCGCGGGGA CGCTGAGCGG CGGACAGCAG
CAGATGCTGG CGATCGCCCG CGCGCTCGCA GCCGAGCCGC GCCTATTGCT GCTCGACGAG
CCGTCGGAAG GGCTCGCGCC CGTCATGGTC GCGGCCATTC GCGAGGCCAT TGTGCAGATG
CGCACGCGAG GAATCGCAGT CCTGCTCGTC GAGCAGAATC TGCAGCTGGC GCTCGGTCTG
GGCGACGTCT TCTACGTGCT CAGCCGCGAC GCCGTCGTCT TTCACGGCAG CCGGCAGGAC
ATCCTGCAAT CCCAGATCAT CGGACAGCAC CTCGGCATCG ATCTGCGTGA GACCGAGCGG
GCCTGA
 
Protein sequence
MTLHLKAVHV HLGSAHILHG IDLDVRPGEI VCLLGRNGVG KSTTLRTIMG LVAPSQGELS 
FEGQRIAGLP PHRVCARGIA WVPEDRRVFA SLTVEENIRV AAEITGPRSA QARAEAAIAP
FPDLRGKLKQ RAGTLSGGQQ QMLAIARALA AEPRLLLLDE PSEGLAPVMV AAIREAIVQM
RTRGIAVLLV EQNLQLALGL GDVFYVLSRD AVVFHGSRQD ILQSQIIGQH LGIDLRETER
A