| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2362 |
|---|
| Symbol | nadB |
|---|
| ID | 5150263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2451983 |
|---|
| End bp | 2453581 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640557283 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_001238439 |
|---|
| Protein GI | 148253854 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.387844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.121802 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACC ACCAGATCGA GCCGTCAGGC CATGTCGTGA TCGTCGGCGC CGGCATTGCC
GGACTGTTCT GCGCCCTCAA GCTCGCGCCG CAACCTGTCA CGCTGATCTC TGCAACGACG
CTCGGCGAGG ACTCCTTCGG CTCGACCATG CAGGCCGACA TCGCGGCGGC CATTTCTGCC
GACGACACTC CGCAAGCTCA CGCCGCCGAC ATGATCGCGG CCGGGGGTGG CCTGGTGGAG
GCGGCTGCGG CGCTGGAGCT CGCCACTGAT GCGGCGGCGC GGATCGAGGA TCTGATCCGG
CTCGGCGTCG CGTTCGATCG CGATTACAGG GGGGAGTTGG CGACGTCCCG CGCGGCGGCC
CATTCCGTGC GACGCATCCT GAGCGTCTGC GGCGACTTCA CCGGGCAGGC GATCGTGACG
GCCCTGACCA ACGCCGTGCG CGCGACGCCC TCGATCCGCG TGATCGAGAA CCATGTCGTC
GATGCGCTGC TGACGGAGCA CGGCGTCGTG CGCGGCCTGA AATTGCGCAG CTCTGAGGAT
GGATCTGCCG CGCCCCTGCT GATCGCGGCG GGCGCTGTCG TGCTCGCGAC CGGCGGTATC
GGCCATCTGT TCGCCACCAC GACCAATCCA TCTCATGCCA ACGGCATCGG CATGGCGATT
GCCGCGCGCG CCGGGGCCAT CATCGCCGAT CCTGAATTCG TTCAGTTTCA CCCGACGGCG
ATGACAGGCG GCAGGGATCC CGCCCCTGTC GTTACCGAGA GCCTGCGCGG CGCCGGCGCG
ATCCTCGTCA ATCGGCGCGG TCAGCGTTTC ATGCTGCCAC GGCATCCCCT GGTGGATCTT
GCGCCGCGGG ACACCGTCGC GCGCGGCATC ATGGCCGAGA TCTCGGCCGG TCGCGGCGCC
TTCCTCGATG CCCGCGACGT GCTCGACGAC GACGTCGCTG CGCGCTACCC CATCCTCCAT
CGAGCCTGTG TGGCGCGCGG CCTGGATCCG ACCCGGCAGC CGATTCCGGT GGCGCCGGCG
GCGCACTTCC ACATGGGCGG CATCGCGATC GATGCCTGCG GCCGCAGCTC GATCGAGGGC
CTGTGGGCTG CGGGCGAGGT TGCCGCGACC GCGACGGACG GCGCCAACCA TATCGCCGGC
AACGCGGTGC TGGCCGCGCT TGTCTTCGCC AACCGGATCG CCACGGACAT CTCCGGTCGA
ACGTTCGCCC CCGCATCGAA TCTGCAGAGG ATCGCCTTCG CCGAGCCGGG CGGCGCCGAC
CCCACGCTCA CCGAGGGAAC GTTGCGCGAG ATCATGACCA GCCAGGTCGG CGTGATCCGC
GACGAGGAAC GGCTGGCCGA CGCCATCGCC GTCATTGCCA GGCTCGAGCG TGACGGCTGC
AATTCCACCC TGCGCAACAT GGCTACAGCG GCGCTGCTGA TCGCGACGGC CGCCTGGAGC
CGGCGCGAGA GTCGCGGGGC GCATTGCCGC GCCGATTGCC CTGCGGAGAA TCCAAGCTTC
GCGCAGCGCA CGATGACGAC TTTGGCCGCC GCGCGCGAGA TCGCCGACCA GCTCGCCGAT
CGGCCGTCGA TACGCCTGCC GCGGCCGCTG AGCGCATAG
|
|---|
| Protein sequence | MNHHQIEPSG HVVIVGAGIA GLFCALKLAP QPVTLISATT LGEDSFGSTM QADIAAAISA
DDTPQAHAAD MIAAGGGLVE AAAALELATD AAARIEDLIR LGVAFDRDYR GELATSRAAA
HSVRRILSVC GDFTGQAIVT ALTNAVRATP SIRVIENHVV DALLTEHGVV RGLKLRSSED
GSAAPLLIAA GAVVLATGGI GHLFATTTNP SHANGIGMAI AARAGAIIAD PEFVQFHPTA
MTGGRDPAPV VTESLRGAGA ILVNRRGQRF MLPRHPLVDL APRDTVARGI MAEISAGRGA
FLDARDVLDD DVAARYPILH RACVARGLDP TRQPIPVAPA AHFHMGGIAI DACGRSSIEG
LWAAGEVAAT ATDGANHIAG NAVLAALVFA NRIATDISGR TFAPASNLQR IAFAEPGGAD
PTLTEGTLRE IMTSQVGVIR DEERLADAIA VIARLERDGC NSTLRNMATA ALLIATAAWS
RRESRGAHCR ADCPAENPSF AQRTMTTLAA AREIADQLAD RPSIRLPRPL SA
|
|---|
| |