Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2318 |
Symbol | |
ID | 5155853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2397222 |
End bp | 2400686 |
Gene Length | 3465 bp |
Protein Length | 1154 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640557241 |
Product | condensin subunit Smc |
Protein accession | YP_001238397 |
Protein GI | 148253812 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCA CGCGTCTTCG TCTTCACGGT TTCAAGACGT TCGTCGAACC GACTGATTTC GTGATCGAAC CCGGCCTCAC CGGCGTCGTC GGTCCGAACG GCTGCGGCAA GTCGAATCTG GTCGAGGCGC TGCGCTGGGC GATGGGCGAG ACCTCGCACA AATCTCTGCG CGCGGCTGAC ATGGACGCGG TGATCTTCTC CGGCTCGAAC ACCCGTCCGG CGCGCAACCA CGCCGAAGTG GTGATGACGA TCGACAACAG CGATCGTACC GCGCCGGCCG CCGTCAACGA CCGCGACATT CTCGAAATCT CGCGCCGCAT CGAGCGCGAG GCCGGCTCGG TCTATCGCAT CAACGGCCGC GACGTGCGCG CCCGCGACGT GCAGATCCTG TTCGCCGACG CCGCCACCGG CGCGCGCTCA CCGGCGCTGG TCCACCAGGG CAAGATCGGC GAGATCATTC AAGCCAAACC CGAGCAGCGC CGCCGCGTGC TGGAAGACGC CGCCGGCGTC GCCGGCCTGC ATGCGCGCCG CCACGAGGCC GAACTGCGGC TGAAGGCGGC CGAGACGAAC CTGCTGCGCG TCGAGGACGT CATCGGCCAG CTCTCCGGCC AGATGGAAGG CCTGCGCAAG CAGGCGCGCC AGGCGATCCG CTATCGCGAG GTCGCCGCCA AGGTGCGCAA GGCGGAAGCC ACGCTCTATC ATCTGCGCTG GATGGGCGCG CATGCCGACC TCAACGACGC CGCGCGGGTG CACGATCTCA GCGTGCGCGA GATGGCGGAG CGGACCCGCG AGCAGGCCGA ATCGGCCCGC ATCCAGGCCA TCCGCTCGTC GCATCTGCCG GCGCTGCGCG AGGCCGAGGC CCGTGCCGCG GCGACGATGC AGCGGCTGAA GAATGCCCGC GACCTACTCG ACCGCGAGGA GCTGCGTGCC AAGGAGCGCG CCGGCGAGCT CGACCGCCGC CTGATGCAGC TCACTGCCGA CGTCGCGCGC GAGCAGCAGC AGAACCAGGA TGCCCAGGTC GCGCTGCAGC GCCTGGAGAC CGAAGACGCG GAGCTGAAGG AAGAGATCAA GGCGCGCGTC GAGATGCGCA GCGGCGTCGA CGAGCGTGTC GCCGAGGCCG AGGCGCTGCT CGCCGAGACC GAGCGCCAGT TCACCGAGCT GACGACGCAG CTCGCCGATC TCACCGCGCG GCGCAACCAG CTCGAAGCCA ACGTCCGCAG CCATCGCGAC CGGCTGGCCC GCCTCGACCA GGACATCGCC AATGTCCGCG CCGACGAGGA GCGGCTGGCG CAGGAGACCG CCCATCTCGG CGACCTCGAC ACGCTCGCGG CCGCGCTCGA AGCGGCCGAA GAGGCCGAGG CGCAGGCCGA GGCCGCGGTG CAGACCAACG AGTCGGCGCA GGCCGCCGCG CGGCAGAAGC TCGAAGCCTC GCGCGCCCCG CTCGCCGAGG CCGAGAAGCG TGCGCAGCGG CTGGAGACCG AGGCGCGCAC CATCTCCAAG ATGGTCAACA GCGAGACCAA GAATCTGTGG CCGCCGATCA TCGACGGCGT CACCGTCGCC AAGGGCTATG AGAAGGCGCT CGGCGCCGTG CTCGGCGACG ATCTCGATGC GCCCGTCGAT GCCTCCGCGC CGATGCACTG GACCGTGGCA GGCGCCGAGG TCACCGATCC CGCGCTGCCC GATGGCGTCG AGCCGCTCGC GGCCTATGTC CAGGCGCCGC CGGAGCTGTC GCGGCGGCTC GCCCAGATCG GCGTCGTGTC GCGCGATCGC GGTGCCCAGC TGGTGTCGCA GCTGCGCACC GGCCAGCGGC TGGTGTCGCC GGAAGGCGAC GTCTGGCGCT GGGACGGCTT CATCGCCGCC GCGCATGCGC CGACCGGCGC GGCCCGCCGT CTTGCCGAGC GCGCCCGCCT GATCGACATC GAGGCCGAGC TGGAGCAGGC GCGCATCGAT GCGACGAACA AGCGCCAGGC GCTGGAGAGC GCAGAGGCCG AGGTGAAGGC GGCGACATCA GCCGAGAGCG CCGCGCGCGA AGCCTGGCGC GCCGCCCAGC GCGAGGTCAA TTCGGCGCGC GAGCGCCACG CCAATGCCGA GCGCGAGATC AACCGCCATT CGGCGCGCAA ATCGGCGCTG GTCGAGGCGT CCACCCGCTT GGCCCATGAC CGCGCCGAGA TCGCCGAGCT GCACCAGAAT GCGCTGGAGG CGATTGAGGA GCTGCCGCCG ACCACCGAAG CCGATGGCCG GCTGGCGGCC GTGCGCGCCG AGATCGAGGC CAAGCGCCGC GCCGCGGCGC AGGTCCGCGC CGAGGCCCAG GCGCTGGCCC GCGAAGCCGA ACTCGCCGAC CGCCGCGTCC AGGCGATCAT CACCGAGCGC AACGACTGGT TCAACCGCAT CCGCGGCGCC GGCTCGCAGA TCGCCACGAT CGAGGCGCGC ATCGCCGAGG TGAAGGACGA GCGTGCCGAG CTGGAGAATG CGCCGGAGAT CTTTGCCGAG AAGCGCAGTG CCCTGATCGA CGAGCTCGCC ATCGCCGAGG AAGAGCGCCA GGTCGCGGCC GACGCGCTGG CCGAGGCCGA GACCGCGATG GGCGACACCG ATCGCGCCGC CAAGGCCTCG CTGGAAGCAT TGTCGAAGGC GCGCGAGGCC GCCGCCCGCG CCGAGGAGCG GCTGGAAAGC GCCAAGCGTC GCGTCGCCGA TGTCGAGCGC GAGATCCACG ACATGCTCGA ATGCGAGCCG CAGGCCGTCG CCGCCATGGC CGAGATCGGC CCGGACACCG AGCTACCGCC GCTGCACGAG ATCGAAGAGA CCCTGGAAAA GCTGCGGCGC GACCGCGAGC GGCTCGGCGC CGTCAATCTG CGCGCCGAGG AGGAGCTCAC CGAGGTCGAG GGTTCGCACA CCGCGCTGAC CACCGAGCGC GACGACCTCG TCGAGGCCAT CAAGCGGCTG CGCCAGGGCA TCCAGAGCCT CAACAAGGAG GCGCGCGAGC GCCTGCAGTC CTCGTTCGAG ACCGTCAACG ATCACTTCAA GCGTCTCTTC ACCGAGCTGT TCGGCGGCGG CGAGGCGGCG CTGCACCTGA TCGAGAGCGA CGACCCGCTC GAGGCCGGCC TCGAGATCAT CGCCAAGCCG CCGGGCAAGA AGCCGCAGAC GCTGTCGCTG CTGTCGGGCG GCGAGCAGGC GCTGACCGCG ATGGCGCTGA TCTTCGCGGT GTTCTTGACG AACCCATCGC CGATCTGCGT GCTGGACGAG GTCGACGCGC CGCTCGACGA CCACAACGTC GAACGCTTCT GCAACCTGCT GCATGAGATG AAGGGCTCGA CCGAGACCCG TTTCATCATC ATCACCCACA ACCCGATCAC CATGGCGCGC ATGAACCGGC TGTTCGGCGT CACCATGGCG GAGCGCGGCG TGTCGCAGCT CGTCTCGGTC GCGCTCGACG AGGCCGTGAA GATCCTCGAC CAGCAGGTGG CGTGA
|
Protein sequence | MKLTRLRLHG FKTFVEPTDF VIEPGLTGVV GPNGCGKSNL VEALRWAMGE TSHKSLRAAD MDAVIFSGSN TRPARNHAEV VMTIDNSDRT APAAVNDRDI LEISRRIERE AGSVYRINGR DVRARDVQIL FADAATGARS PALVHQGKIG EIIQAKPEQR RRVLEDAAGV AGLHARRHEA ELRLKAAETN LLRVEDVIGQ LSGQMEGLRK QARQAIRYRE VAAKVRKAEA TLYHLRWMGA HADLNDAARV HDLSVREMAE RTREQAESAR IQAIRSSHLP ALREAEARAA ATMQRLKNAR DLLDREELRA KERAGELDRR LMQLTADVAR EQQQNQDAQV ALQRLETEDA ELKEEIKARV EMRSGVDERV AEAEALLAET ERQFTELTTQ LADLTARRNQ LEANVRSHRD RLARLDQDIA NVRADEERLA QETAHLGDLD TLAAALEAAE EAEAQAEAAV QTNESAQAAA RQKLEASRAP LAEAEKRAQR LETEARTISK MVNSETKNLW PPIIDGVTVA KGYEKALGAV LGDDLDAPVD ASAPMHWTVA GAEVTDPALP DGVEPLAAYV QAPPELSRRL AQIGVVSRDR GAQLVSQLRT GQRLVSPEGD VWRWDGFIAA AHAPTGAARR LAERARLIDI EAELEQARID ATNKRQALES AEAEVKAATS AESAAREAWR AAQREVNSAR ERHANAEREI NRHSARKSAL VEASTRLAHD RAEIAELHQN ALEAIEELPP TTEADGRLAA VRAEIEAKRR AAAQVRAEAQ ALAREAELAD RRVQAIITER NDWFNRIRGA GSQIATIEAR IAEVKDERAE LENAPEIFAE KRSALIDELA IAEEERQVAA DALAEAETAM GDTDRAAKAS LEALSKAREA AARAEERLES AKRRVADVER EIHDMLECEP QAVAAMAEIG PDTELPPLHE IEETLEKLRR DRERLGAVNL RAEEELTEVE GSHTALTTER DDLVEAIKRL RQGIQSLNKE ARERLQSSFE TVNDHFKRLF TELFGGGEAA LHLIESDDPL EAGLEIIAKP PGKKPQTLSL LSGGEQALTA MALIFAVFLT NPSPICVLDE VDAPLDDHNV ERFCNLLHEM KGSTETRFII ITHNPITMAR MNRLFGVTMA ERGVSQLVSV ALDEAVKILD QQVA
|
| |