Gene BBta_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2299 
Symbol 
ID5155186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2378972 
End bp2379448 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID640557225 
Productputative tRNA/rRNA methyltransferase 
Protein accessionYP_001238381 
Protein GI148253796 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.727719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG CGCTCTATCA GCCCGACATT CCGCAAAACA CCGGAACGAT TCTGCGCCTG 
TGCGCCTGCC TCGGGCTCGC GGCCCACATC ATCGAGCCGG CCGGCTTCGC CGTCTCGGAC
CGGCAGTTTC GCCGCGCCGG CATGGACTAT CTCGATCATC TCGCATGGCG GAGGCACGAT
TCCTGGAGCG CCTTCGAGGA CTGGCGGGCC GCGCAGGGCC ACCGGCTGCT GCTGTTCACG
ACCAAGGCGG CAACCTCCTA CCTGGATTTC AGCTACAAGG CGGACGACAT CCTGCTGCTC
GGGCGCGAGA GCGCCGGCGT GCCCGACACG GTGGCGGAGG TCGCCGACGC GCGGCTGCGC
ATTCCGCTGA GGCCCGGCCT GCGCTCGCTC AACGTCGCCA TGGCCGCCGC GATGGCCGCG
GGCGAAGCAC TGCGCCAGGT TGGACATTTC GTCCAATTGC AATCTGAGGG AGCGTGA
 
Protein sequence
MQIALYQPDI PQNTGTILRL CACLGLAAHI IEPAGFAVSD RQFRRAGMDY LDHLAWRRHD 
SWSAFEDWRA AQGHRLLLFT TKAATSYLDF SYKADDILLL GRESAGVPDT VAEVADARLR
IPLRPGLRSL NVAMAAAMAA GEALRQVGHF VQLQSEGA