Gene BBta_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2207 
Symbol 
ID5155923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2282138 
End bp2282788 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID640557137 
Productputative outer membrane protein of unknown function 
Protein accessionYP_001238293 
Protein GI148253708 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.533668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAT TTTTTGGACG TTTTGCCATG CGAGCGACGA CGGTGGCTGC CGTGCTGGCC 
CTGGGCGCAG GTGCCGCTCT CGCCGGCGAA GCCGTGTCCG CCGATCAGAT CCTGAACGCG
TTGAAGCCGA AACCCGCCAC CCGCGGCCTG TCTGTCGGGC CGCAGGCCGC CCCGCAAATC
GACGCGACCG CCCAGGCGAA GCAGTCGACC TTCATCGACA GCATGCGCAA CCGCAAGACC
CGGTCGCTGT CGCTCGGCGA GCGCGAGCAG CTGGCCGAGA TCGCCGCGAC CAAGCCGAAG
ATCGATCTCG AGATCCAGTT CGACTACAAT TCGGCCGCGA TCAGCAAGAC CTCGATCCAG
GCGGTGCAGG AACTCGGCAA GGCGCTGTCC GATCCGAACC TGAAGGGCTC GACCTTCATG
GTGGCCGGCC ACACCGACGG GATCGGCAGC GACGGCTTCA ATCAGGATCT GTCGGAGCGC
CGCGCCGACA CCCTCAAGCG CTATCTGGTC GAGAAATTCG GCCTGGCCGG GCAGGACCTC
GTGACCGTCG GCTACGGCAA GACCAAGCTG AAGGATGCCG CGAACCCCGC CGATCCGGTC
AACCGTCGGG TCCAGGTCGT CAACATGGAC ACCAAAACCG CGGCGAAGTG A
 
Protein sequence
MTVFFGRFAM RATTVAAVLA LGAGAALAGE AVSADQILNA LKPKPATRGL SVGPQAAPQI 
DATAQAKQST FIDSMRNRKT RSLSLGEREQ LAEIAATKPK IDLEIQFDYN SAAISKTSIQ
AVQELGKALS DPNLKGSTFM VAGHTDGIGS DGFNQDLSER RADTLKRYLV EKFGLAGQDL
VTVGYGKTKL KDAANPADPV NRRVQVVNMD TKTAAK