Gene BBta_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2109 
Symbol 
ID5155195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2182048 
End bp2183019 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID640557046 
Productputative UDP-glucose 4-epimerase 
Protein accessionYP_001238202 
Protein GI148253617 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.947732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTTC TGATCTTCGG CGGCGCCGGC TTCGTCGGGC TCAACGTGGC GCAAGGCCTG 
CTGGAGCGTG GCCACGCCGT CACCATGTTC GATGCGGCGC CTCTGCCGAA TGCTGCGCAG
CGCGCCTTTG CTGATCACGG TGATCGGCTG CACGTGATCA CGGGCGATGT CACTGACGAG
CGCGCCGTTG CTTCTGCCAT TGCCGGCGGC TGCGATGCCG TCGTGATGGG CGCGGCGATC
ACCGCCGGGC CCGAGCGCGA TGCGGCGGAC CCCGAGCGCA TCCTCGCGGT CAACCTGCTG
GCGCAGGTGC CGATCCTGCA GACGGCACGG AGCAGCGGCG TGCGCCGCGT GATCAACCTG
TCCTCGGCGG CGTCCTACGG CGCGAGCGGC CAGCGCTTCG CCGTGCTGGA GGAGACGATG
CCGTGCGAGC CGGTATCGCT TTATGCGATC ACCAAGTTCG CCTCCGAGCG CGTCGCGTCG
CGGCTCTCCG ATCTGTGGCA GACCGACGTG ATCAGCGTGC GGCTGTCGGC GGTGTTCGGC
CCGTTCGAGC GTGGCGGCGG CGTGCGCGAC ACGCCGTCGC CGCAGGCTTT GATCGCGGCC
TGCTGCGCGC GTAACGAAGC GGCACTGCTG GACGAGCCGG GCGAAAAGGA TTGGGTTTAC
GCCGTGGACG TCGCCGACGC GGTCTGTCTG CTGCTCGAAG CCGACAAGCC GCAGCATAGG
CTGTACAACA TCTCCAACGA AGCGACGTTC ACGGCCGAAG CGTGGGGACG CAGCTTTGCC
CAAGGCCGCC CCGGCTTTGT CTGCCGCCTC GCCACGCAGG GGGAGACACC GAGCGTGCCG
GTGTTTGCGC CGAGCCGCGG GCGGCTGTCG ACGACGCGGC TCGCGGATGA GTTTGGCTGG
CGCGCGCGCT TCGACTGTGT AGGCTCCGCC GAGCATTTCG GCCGCTGGTT CGATCAATAT
GGGAGAGGCT GA
 
Protein sequence
MHVLIFGGAG FVGLNVAQGL LERGHAVTMF DAAPLPNAAQ RAFADHGDRL HVITGDVTDE 
RAVASAIAGG CDAVVMGAAI TAGPERDAAD PERILAVNLL AQVPILQTAR SSGVRRVINL
SSAASYGASG QRFAVLEETM PCEPVSLYAI TKFASERVAS RLSDLWQTDV ISVRLSAVFG
PFERGGGVRD TPSPQALIAA CCARNEAALL DEPGEKDWVY AVDVADAVCL LLEADKPQHR
LYNISNEATF TAEAWGRSFA QGRPGFVCRL ATQGETPSVP VFAPSRGRLS TTRLADEFGW
RARFDCVGSA EHFGRWFDQY GRG