| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2041 |
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| Symbol | |
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| ID | 5153201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2110891 |
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| End bp | 2112015 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640556980 |
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| Product | RND family mulitdrug efflux protein |
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| Protein accession | YP_001238136 |
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| Protein GI | 148253551 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.527576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCAT TCATGCGATC TCCCCCTCCC GCTTGGTCAT CAAGCCCTCG CCTTGTGATC
ATGGCTGGTT GTGCCGCGGC AGGGCTGCTG CTGACGGGCT GCGACCGCAA GGCGGACGTC
GCCAAGCAAC CGGCCCGGCT GGTGCAGATC GAGACGGTGA AGCTGTCGGA GCGGCGGCAA
TCGATCACGC TGACGGGCGA TGTCCAGCCG CGCGTGCTCG CGGACCTGTC GTTCCGGGTC
AGCGGCCGTG TCACCGAGCG GCTCGTCGAG GTTGGCGCAC ATGTCACGGC TGGCCAGGTG
CTGGCCAGGA TCGATCCCGC CGAACAGCAG GCCGACCTGG ATTCCGCCGA AGCGGCGGTC
AGCGCCGCGG AATCGCAGGT CAAGGTCGCG ACCTCCAATT TCAATCGCCA GCAGACCTTG
TTGTCGAGCG GCTTCACGAC CAGGGCGACG TTCGATCAGG CCCAGGAGAC GCTGCGGACC
GCGGAAGGAT CGCTGGAAGC CGCCAAGGCG CAGCGCGACA CCGCGAAGGA TGCGCTCACC
TACACCGAGC TGCGCGCCGA CGCCGATGGC ACGATCACCG CGCGCAACAT CGAGGCCGGC
CAGGTCGCGC AGGCCGCACA GCCGGTGTTC ACGCTCGCCC GTGACGGCGA CCGCGATGCC
GTCATCGATG TCTACGAAGC AGCGCTGTCG CTGAAATTCG ACGACACCAA GGTCGCGCTG
GCACTGCTCT CGGATCCTTC CGTGACCGCC AAGGGCCGCG TGCGCGAGGT CTCGCCGACC
ATCGATTCCA AATCCGGAAC GGTTCGCGTC AAGATCGCGA TCGAGAATCC GCCGCCCGAG
ATGATCCTGG GCAGCGCCGT GTCCGCCACC GGCTTCATCA AGCCCGAGCA GCGCATCGTG
CTGCCGTGGA GCGCGCTGAC CGCGACCGGC AAGACGCCGG CTGTCTGGCT GGTCGATGAC
AGCGACAAAT CGGTGTCGCT CAAGCCGATC ACGATCGAGG ACTACGAGAC CGGCGCCATC
GTCGTCTCCT CCGGACTGAA GCCGGGCGAT CGCGTCGTGA CCGAGGGCGG CAAGCTGCTC
AGCGTCGGAC AGAAGGTCAC ATTCAACGAG GAGACGCGGT CGTGA
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| Protein sequence | MISFMRSPPP AWSSSPRLVI MAGCAAAGLL LTGCDRKADV AKQPARLVQI ETVKLSERRQ
SITLTGDVQP RVLADLSFRV SGRVTERLVE VGAHVTAGQV LARIDPAEQQ ADLDSAEAAV
SAAESQVKVA TSNFNRQQTL LSSGFTTRAT FDQAQETLRT AEGSLEAAKA QRDTAKDALT
YTELRADADG TITARNIEAG QVAQAAQPVF TLARDGDRDA VIDVYEAALS LKFDDTKVAL
ALLSDPSVTA KGRVREVSPT IDSKSGTVRV KIAIENPPPE MILGSAVSAT GFIKPEQRIV
LPWSALTATG KTPAVWLVDD SDKSVSLKPI TIEDYETGAI VVSSGLKPGD RVVTEGGKLL
SVGQKVTFNE ETRS
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