| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2039 |
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| Symbol | |
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| ID | 5153199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 2106744 |
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| End bp | 2109821 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640556978 |
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| Product | RND family mulitdrug efflux protein |
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| Protein accession | YP_001238134 |
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| Protein GI | 148253549 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTCCT TCAATCTCTC CGACTGGGCC CTCGAGCACC GTTCGCTCGT CTGGTACTTC
ATGATCGCCT TCATGGCGGC CGGCCTCTAC TCCTATCTGC ATCTGGGACG CGAGGAGGAT
CCGTCCTTCA CCATCAAGAC GATGCTGATC CAGGCCAAAT GGCCCGGCGC CTCGGCCGAG
GAGATGACGC GGCAGGTCAC CGAGCGGATC GAGAAGAAGC TCGAGGAGCT GCCGGCGCTC
GACTACACCA AGAGCCTGAC CGTGCCGGGC CAGACCACCG TGTTCGTCAA TCTGCGCGAC
ACGACCAAGG CGCGCGACGT GGTGCCGACC TGGCTGCAGG TCCGCAACCT GATCAATGAC
ATCAAGGGCG ACTTCCCGTC GGGCGTGGTC GGGCCCGGCT TCAACGACCG CTTCGGCGAC
GTGTTCGGCA ACATCTACGC CTTCACCAGC GACGGCTTGA GCCAGCGCCA GCTGCGCGAC
CGCGTCGAGG AGGTCCGCGC CAAGGTGCTG ACGGTGCCGA ATGTCGGCCG CGTCGACATC
GTCGGCGCGC AGAACGAGGT GATCTATCTC GAATTCTCGC CGCGCAAGGT GGCCGCGCTC
GGCATCGACC AGCGCACCAT CCTCAACGCG CTGCAGGCCC AGAACGCGGT GTCGCCGTCC
GGCGTGCTCC AGGCGGGCCC CGAGCGCGTT GCGGTGCGCG TCTCCGGCCA GTTCACCTCG
GAGGAGAGCC TCAAGGCGAT CAACCTGCGC ATCAACGACC GCTTCTTCCC GCTCACCGAC
GTCGCCACCA TCAGCCGCGG CTACGAGGAT CCGCCGACCT CGCTGTTCCG CTTCAACGGC
CAGCCGGCCA TCGGCCTGGC CATCGGCATG AAGGCCGGCG CCAATCTGCT CGATTTCGGC
GAGGCGCTGA AGGAGGAGAT GACCAAGGTC GTTGCCGACC TGCCGGTCGG CGTCGGCGTG
CATCTCGTCT CGGACCAGCC CAAGATCGTC GAGGAAGCGG TTGGCGGCTT CACCAAGGCG
CTCTACGAGG CCGTCATCAT CGTGCTCGCG ATCAGCTTCG TCAGCCTCGG CGTGCGCGCC
GGCCTGGTCG TCGCGATCTC GATCCCGCTG GTGCTCGCGA TCACCTTCCT GGTCATGGCC
TATACCGGCA TCTCGCTGCA GCGCATCTCG CTGGGCGCGC TGATCATCGC GCTCGGCCTC
CTCGTCGACG ACGCCATGAT CGCGGTCGAG ATGATGGTAG CGCGGCTCGA GGTCGGCGAT
TCGCTGAAGA AGGCGGCGAC CTATGTGTAC ACGTCCACGG CGTTTCCGAT GCTGACGGGA
ACGCTGGTCA CGGTCGCCGG TTTCATCCCG ATCGGGCTGA ACAACAGCGC CGCCGGCGAA
TTCACCTTCA CGCTCTTCGT CGTGATCGCG GTCTCGCTGA TCGTATCGTG GATCGTGGCC
GTGCTGTTCA CGCCGCTGCT CGGGGTCACC ATCCTGCCCG CGAGCCTGCC GAGCCACCAT
GCCGAGGCGG GCCGGCTGAC GCGGATGTTC CGCGCCATGC TCGACGCCTG CATGCGGCAT
CGCTGGACCA CGATCATCGT GACCGTCCTG ATCTTCGCTC TCTCGGTGTT CGGGATGCGC
TTCGTGCAGC AGCAGTTCTT CCCCTCCTCG GACCGCAACG AGCTGGTGAT CGACTTCAAC
CTGCCGCAGA ATTCCTCGAT CGCCGAGACC AATGCGCAGA TGGCGAGGTT CGAGCAGGAG
GCGCTCAAGG GCGATCCTGA TATCGACCAT TGGTCGACCT ATGTCGGCTC CGGCGCGCAG
CGCTTCGTCC TGTCGTTCGA CGTGCAGCCG GCCGACGTGT CGTTCGGCCA GATCATCGTC
GTGACCAAGA GCCTGGAGGC GCGCGACCGC GCCCGCGCCA AGCTGCAGAC CTATCTCACC
AAGACCTTCC CCGGCACCGA CGCCTATGTG CATCTGCTCG ACATCGGGCC GCCGGTCGGC
CGCCCGGTGC AATATCGTGT CAGCGGGCCC GATGTCGCCA AGGTGCGCGA AATCGCCCAG
CAGCTCGCCG GCGTGATGCG GGCCAACAGT CATCTCGGCG CCGTCATCTT CGACTGGATG
GAGCCCGCCC GCGTCGTGAA GGTCGACGTG CTGCAGGACA AGGCGCGCCA GCTCGGCGTG
ACCTCATCCG ACATCGCCAA CGCGCTCAAC AGCGTGCTCG ACGGCTCCTC GATCACCCAG
GTGCGCGACG ACATCTATCT CATCGATGTG CGCGGCCGCG CCCAGGCCAA GGAACGGCAA
TCGCTGGAGA CGCTGCGCGA CCTGCAGCTG TCGGGCTCGA ACGGCCAGTC GATCCCGCTC
GCCGCGCTCG CGACGCTGCG CTACGAGATC GAGCAGCCCG AGATCTGGCG GCGCTCGCGG
CAGCCGACGC TGACCCTGAA GGCCAGCGTG ATCGATCAGG TCCAGCCGAA CACGGTGGTC
GATCAGCTCA AGCCCGCGAT CACGGCCTTC AACGCCAAGC TTCCGGCCGG CTTCAAGGTC
GTCACCGGCG GCGCGGTCGA GGAAAGCGCC AAGAGCCAGG CGCCGATCAT TGCCGTCGTT
CCGATCATGC TGTTCACGAT GGCCACCATC CTGATGCTGC AGCTGCAGAG CTTCCAGCGC
CTGTTCCTGG TGTTCGCAGT GGCGCCACTG GCGCTGATCG GCGTTGTCGC GGCGCTGCTG
CCGAGCGGCG CGCCGCTCGG CTTCGTCGCC ATCCTCGGCG TGCTCGCACT GATCGGCATC
CTGATCCGCA ACTCGGTGAT CCTGATCGTG CAGATCGAGC ATCTGCGCGA CGAGGGCCGG
CCGCCCTGGG AGGCGGTGAT GGAGGCGACC GAGCACCGCA TGCGGCCGAT CATGCTGACC
GCCGCCGCAG CCTCGCTGGC GCTGATTCCG ATCGCCCGCG AGGTGTTCTG GGGCCCCATG
GCCTATGCGA TGATGGGCGG CATCATCGTC GGCACCGTGC TGACGCTCCT GTTCCTGCCG
GCGCTCTACG TCGCCTGGTT CCGCATCAAG ACGCCGGAGA ACAGCGCAGC GGCCGATGCC
GCTCCGCATG GGGCCTAA
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| Protein sequence | MKSFNLSDWA LEHRSLVWYF MIAFMAAGLY SYLHLGREED PSFTIKTMLI QAKWPGASAE
EMTRQVTERI EKKLEELPAL DYTKSLTVPG QTTVFVNLRD TTKARDVVPT WLQVRNLIND
IKGDFPSGVV GPGFNDRFGD VFGNIYAFTS DGLSQRQLRD RVEEVRAKVL TVPNVGRVDI
VGAQNEVIYL EFSPRKVAAL GIDQRTILNA LQAQNAVSPS GVLQAGPERV AVRVSGQFTS
EESLKAINLR INDRFFPLTD VATISRGYED PPTSLFRFNG QPAIGLAIGM KAGANLLDFG
EALKEEMTKV VADLPVGVGV HLVSDQPKIV EEAVGGFTKA LYEAVIIVLA ISFVSLGVRA
GLVVAISIPL VLAITFLVMA YTGISLQRIS LGALIIALGL LVDDAMIAVE MMVARLEVGD
SLKKAATYVY TSTAFPMLTG TLVTVAGFIP IGLNNSAAGE FTFTLFVVIA VSLIVSWIVA
VLFTPLLGVT ILPASLPSHH AEAGRLTRMF RAMLDACMRH RWTTIIVTVL IFALSVFGMR
FVQQQFFPSS DRNELVIDFN LPQNSSIAET NAQMARFEQE ALKGDPDIDH WSTYVGSGAQ
RFVLSFDVQP ADVSFGQIIV VTKSLEARDR ARAKLQTYLT KTFPGTDAYV HLLDIGPPVG
RPVQYRVSGP DVAKVREIAQ QLAGVMRANS HLGAVIFDWM EPARVVKVDV LQDKARQLGV
TSSDIANALN SVLDGSSITQ VRDDIYLIDV RGRAQAKERQ SLETLRDLQL SGSNGQSIPL
AALATLRYEI EQPEIWRRSR QPTLTLKASV IDQVQPNTVV DQLKPAITAF NAKLPAGFKV
VTGGAVEESA KSQAPIIAVV PIMLFTMATI LMLQLQSFQR LFLVFAVAPL ALIGVVAALL
PSGAPLGFVA ILGVLALIGI LIRNSVILIV QIEHLRDEGR PPWEAVMEAT EHRMRPIMLT
AAAASLALIP IAREVFWGPM AYAMMGGIIV GTVLTLLFLP ALYVAWFRIK TPENSAAADA
APHGA
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