| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2008 |
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| Symbol | hypF |
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| ID | 5150437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2072506 |
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| End bp | 2074764 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640556949 |
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| Product | carbamoyl phosphate phosphatase, (NiFe) hydrogenase maturation protein |
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| Protein accession | YP_001238105 |
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| Protein GI | 148253520 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.08798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGT CCGGGCCGAC ATTGGCGCTG CAGCCCAGGC GTCTCCGGCT CCGCGTCCGC
GGGGCCGTGC AGGGCGTGGG CTTTCGCCCC TATGTCCATG GTCTGGCCCG GCGCCATCAT
CTTGGGGGCT TCGTCGCCAA TGACGCGCAG GGCGTCGTGA TCGAGGTCGA AGGCGAGGAG
GTGGCGCGCT TCGTCGAGGC GCTGCCGCGG CAGGCCCCGC CATTGGCGCG CATCGATGAC
ATCGCGGTCG AACCCGTTGC GGCCCAGGCC AGCCGCGACT TCCGCATCTC GGAAAGCGTC
GGCGGCCGGG TGACGACGCG GATCGTGCCG GACGCCGCCA CGTGCGATCA GTGCCTCGCC
GAACTGTTCG ATCCCGAGAG CCGCTTCCAT CGCTATCCCT TCGTCAACTG CACCCATTGC
GGTCCGCGCT TCACGATTGC GGAGCGTCTG CCCTACGATC GCGCGACCAC GGCGATGAAG
CGGTTTCCGC TGTGCGAGGC GTGCCGTGCG GATTACGAGA CTCCGGGCGG GCGCCGCTTC
CATGCCGAGG CGATTTCATG CCCGCGCTGC GGGCCGCGTC TGAGCCATGG CGTCGACGAC
ATCGCGGCAG CGCTGGCTGC CGGCCAGATC GTCGCCATCA AGGGGCTCGG CGGCTATCAG
TTGCTCTGTG ACGCCCATGA TGAGCAGGCC GTCCGGCGTC TGCGCGCGCG CAAGCGGCGC
GACGGCCGGC CGTTCGCGGT GATGCTGGCC TCGGTGGCTG CGGCCATCGA GATCGCCGAC
ATCGATCCGG CTGAACGCGC GCTGCTGGAG CAAATCGCAC GGCCGATCGT GCTGGTGACA
TCGCGCGGCG GCATTGCGCC CTCCGTCGCA CCGGGGCTCG CCAAGGTCGG CGTCATGCTG
CCGGTCGCAC CGCTGCACCA TCTGATCTTC CACGAGCTCC GCGCTCTGCA TGGCGCGACG
GCGCGGGCGC TGGTCTGCAC CAGCGCCAAT CTGAGCGGCG AGCCGCTGCT GACCGGCGAT
GACGAGGCCC GTGCCGGATT GGCTGACATC GCCGATCTGA TCGTGACGCA TGACCGTGAT
ATCGTGATCC GTGCGGATGA TTCCGTTGCG GCGGTCATCG CTGATGCGCC TCGCTTCATC
CGGCGTGCAC GCGGCTATGT TCCCGAGCCG ATCCGGCTCG CGCATGCCGT GCCGCCATGT
CTTGCCGTCG GCGCACATCT GAAAGCGACG GTGACGGTGA CTCGCGGTGA CGAGGCGTTC
GTGTCGCAGC ATCTCGGCGA TCTCGACACG GCGCAAGCGA TCCGCTTCTT CGAAGAGACG
ATCGGCCACC TCACCGCCAT TCTCGATGTC GCGCCGGTCT TGATCGCGCA TGATCTGCAT
CCCGACCTGG CCTCGACGCG CTATGCGCAA TCCTGCGGCT TGCCCAGCCT GGCGGTGCAG
CATCACCATG CACATGCCGC CTCGGTGATG GCCGAGCACG GATTGACGGA ACGTGCGCTT
GCGCTGGTGC TCGATGGCTA CGGCTATGGC AGCGATGGCG GCGCTTGGGG CGGCGAGCTG
CTGCTGTGCG AGGGGGCCCG CTTCCAGCGC CTTGGTCATC TCGCGCCGCT GAACATGCCG
GGCGGCGACC GGGCCGCCCG CGAGCCGTGG CGGATGGCGG CCGCCGTGCT GCACGAGATG
GGACGCGATG CGAAGATTGC GTCGCGCTTC GCCGCGCAGC CCCAAGCACC TCACCTCGCG
ATGCTGCTGC AGCGCGCCGA TGCCCCGGCC ACGACCAGCG CCGGCCGGCT GTTCGATGCC
GTCGCGGGAC TGCTCGGCGT CAACATGGTC CAGAGCTATG AGGGCGAAGC TGCGATGAAG
CTCGAGGCGC TCGTGCGTGA GCCGGTGACG CTGGCGCGCG GCTGGAGCAT CAGGGATGGC
GTGCTGTCGC TGCGTCCCCT GCTTGCGCAT CTGATCGAGG GCAATCTCGA GGCCGCCGAG
GCGGCGGCGC TGTTTCACGG CACTTTGGCC GCGGCCTGTG TCGATCTGAT CGCGACCGCG
GCCCGTGCGA CCGGCATCGA GATCGTCACG CTGAGCGGCG GCTGCTTCCT CAATGCGCAT
CTGGCGACGC AGATCATCCG CGGCTGCCGC GCTGCCGGCC TCGATGCGCG ACTGCCGCGC
CAACTGCCGC CGAATGATGG CGGGCTCAGC CTCGGGCAGG CCTGGATCGC CGGTCAGCGT
GTCATACAAG ACCAAAAAAT CTCTGGAGGG AGCGTCTGA
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| Protein sequence | MSTSGPTLAL QPRRLRLRVR GAVQGVGFRP YVHGLARRHH LGGFVANDAQ GVVIEVEGEE
VARFVEALPR QAPPLARIDD IAVEPVAAQA SRDFRISESV GGRVTTRIVP DAATCDQCLA
ELFDPESRFH RYPFVNCTHC GPRFTIAERL PYDRATTAMK RFPLCEACRA DYETPGGRRF
HAEAISCPRC GPRLSHGVDD IAAALAAGQI VAIKGLGGYQ LLCDAHDEQA VRRLRARKRR
DGRPFAVMLA SVAAAIEIAD IDPAERALLE QIARPIVLVT SRGGIAPSVA PGLAKVGVML
PVAPLHHLIF HELRALHGAT ARALVCTSAN LSGEPLLTGD DEARAGLADI ADLIVTHDRD
IVIRADDSVA AVIADAPRFI RRARGYVPEP IRLAHAVPPC LAVGAHLKAT VTVTRGDEAF
VSQHLGDLDT AQAIRFFEET IGHLTAILDV APVLIAHDLH PDLASTRYAQ SCGLPSLAVQ
HHHAHAASVM AEHGLTERAL ALVLDGYGYG SDGGAWGGEL LLCEGARFQR LGHLAPLNMP
GGDRAAREPW RMAAAVLHEM GRDAKIASRF AAQPQAPHLA MLLQRADAPA TTSAGRLFDA
VAGLLGVNMV QSYEGEAAMK LEALVREPVT LARGWSIRDG VLSLRPLLAH LIEGNLEAAE
AAALFHGTLA AACVDLIATA ARATGIEIVT LSGGCFLNAH LATQIIRGCR AAGLDARLPR
QLPPNDGGLS LGQAWIAGQR VIQDQKISGG SV
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