| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1978 |
|---|
| Symbol | |
|---|
| ID | 5151123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2043407 |
|---|
| End bp | 2044372 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556919 |
|---|
| Product | putative ABC transporter |
|---|
| Protein accession | YP_001238075 |
|---|
| Protein GI | 148253490 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.878457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTCC TGGTCCGTCG GATCACCCAG GCCATTCCCA TCCTGATCAT GGTCGGCGTG
ATCAACTTCA CGCTGCTCAA CCTGGCGCCT GGCGATTTCG CGCAGGTGCT GGTCGGCAAC
GCCGGCGGCG CCTCGGCCGA CTATTTGGAT CAGCTCCGCC AGAGCTTCGG CCTTGACCAG
CCCCTCTGGA TACGGCTGGT CAACTATCTC GCACGCCTGG CAAGATTTGA TCTCGGCTAT
TCCTACAGCG CCCATGCGAG CGTGCTCGCC CTGATCGGCC AGCGGGTGAC GGCCACCCTC
TTGTTGACCG GGTCGGCCCT GGCGATGGCT GTGGTGCTTG GCGTCTGCGG CGGCTTCCTG
TCGTCGCTGC GACCCGGCGG CGGGCTTGAT CGGCTGTTGT CGGCGGTGGC GGTCATCATT
TACGCCACGC CCAGTTTCCT TCTCGGGCTG GCCTTGATCA TCCTGTTCAG CGTCAAGCTG
CGATGGCTGC CGGCCGGGGG ACTTTTCGAC GCGATCCCGC CCACGACATG GTCGGGCGCG
CTGGCTTCGC TGCTGGCACA TCTGCTGCTG CCAGCCGTCA CTCTGGCGCT ATTCTTCGCC
TCGATCTACC TGCGTGTCAC CCGCACCGCG ATGCTGGAGG TGCGGGGCCT CGACTATGTC
CGCACCGCGC GCGCAGCGGG ACTTCCGCCC CTGCGCGTGG CACGCCGCTA CGTGCTGCGC
AACGCGCTGT TGCCGGTAGT CACGATCATC GGCTTGCAGG CCGGAACGCT GCTGGGAGGC
GCGATCCTCG TGGAAGTCGT GTTCGCCTGG CCCGGCCTTG GCCGGCTGGC CTTCGAGGCG
GTCTTCCAGC GCGACTACAA CCTGCTGAGC GGCGTGGTGC TGTGCGGGGC GGTCGCAGTG
CTCGCGGTGA ACATCCTGGT CGATCTCCTC TATTCCTGGC TCGACCCGCG GATCGACTTA
CAATGA
|
|---|
| Protein sequence | MWFLVRRITQ AIPILIMVGV INFTLLNLAP GDFAQVLVGN AGGASADYLD QLRQSFGLDQ
PLWIRLVNYL ARLARFDLGY SYSAHASVLA LIGQRVTATL LLTGSALAMA VVLGVCGGFL
SSLRPGGGLD RLLSAVAVII YATPSFLLGL ALIILFSVKL RWLPAGGLFD AIPPTTWSGA
LASLLAHLLL PAVTLALFFA SIYLRVTRTA MLEVRGLDYV RTARAAGLPP LRVARRYVLR
NALLPVVTII GLQAGTLLGG AILVEVVFAW PGLGRLAFEA VFQRDYNLLS GVVLCGAVAV
LAVNILVDLL YSWLDPRIDL Q
|
|---|
| |