| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1943 |
|---|
| Symbol | |
|---|
| ID | 5151753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 2006286 |
|---|
| End bp | 2006969 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640556886 |
|---|
| Product | glutamate synthase (NADPH) GltB3 subunit |
|---|
| Protein accession | YP_001238042 |
|---|
| Protein GI | 148253457 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0070] Glutamate synthase domain 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.513232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCT TCGATCTTGC GAGAGCGCCG CTGCGCGAAC TGAACGCTGC GCTTCATGCG
CTGTCGCCCA CCACCAACGA GACGCATTGG ATCGTCAGCA ATCCCTCAGG CAAGCACGCG
GTCGCCTGCG GGCTCGACGC CCCGGTCACC GTCGAGATCG ACGGTCACGT CGGCTACTAT
TGTGCCGGCA TGAACAAGGC TGCCACCGTC GTGATTTCAG GCAATGCCGG CGTCGGCGTC
GCCGAGAACA TGATGTCCGG CGAGGTTCGC GTCAAAGGCG ACGCCAGCCA ATCGGCCGGC
GCCACCGGCT GCGGCGGGCT GCTGGTGATC GAGGGCAATG CCTCGGCGCG CTGTGGCATC
TCGATGAAGG GCATCGACAT TGTCGTGAAA GGCTCGATCG GGCCGATGAG TGCGTTCATG
GCCCAGGCGG GCAATCTGGT CGTGCTCGGC GACGCCGGCG ATGCGCTCGG CGATTCGATC
TATGAGGCCC GATTGTTCGT GCGTGGCCGC GTCGCCAGCC TGGGCGCCGA CTGCATCGAG
AAGCCGATGA CGGAGGAAGA CCGCGCGATC CTCGCGGCCG TGCTGAAGCG GGCCGGCGTC
GAGGCGCGCG CCGATGACTT CAAGCTCTAT GGCTCGGCGC GGCGCCTCTA TCACTTCCAC
ATCGACAATG TCGACGCCTA TTGA
|
|---|
| Protein sequence | MPSFDLARAP LRELNAALHA LSPTTNETHW IVSNPSGKHA VACGLDAPVT VEIDGHVGYY
CAGMNKAATV VISGNAGVGV AENMMSGEVR VKGDASQSAG ATGCGGLLVI EGNASARCGI
SMKGIDIVVK GSIGPMSAFM AQAGNLVVLG DAGDALGDSI YEARLFVRGR VASLGADCIE
KPMTEEDRAI LAAVLKRAGV EARADDFKLY GSARRLYHFH IDNVDAY
|
|---|
| |