| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1929 |
|---|
| Symbol | |
|---|
| ID | 5151339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1992322 |
|---|
| End bp | 1993248 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640556873 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001238029 |
|---|
| Protein GI | 148253444 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCG TTCAGCTTTC TGAGCTTACG GCATTCGTCG CTGTCGCCGA GCGCCTCAGC
TTCACCAAGG CGGCCCGAGA ACTCGGGATG GCGTTGCCGA CCATCAGCCA GACTGTCAGA
TCGCTCGAGG AGGATCTCGG GGTCCGGCTC TTCAATCGGA CGACCCGCAG CGTGGCGCTG
ACGGAGGCAG GAGAGCGGCT GCTTGCAGAA GTCCTGCCGG TGCTCGAGGG CGTAGGTCAG
GCGCTTGAAA GCATCAACCT GTTCCGGGAG AAGCCGATCG GGACTCTGCG TCTCACCGTC
GTTCGTCCGT TCGGGTTGAG ACAGCTGGCG CCATTGATCC GATCGTTCTC GGCCGAGTAT
CCGGACATTC GTCTGGAGAT CGCTTTGGAC GACGCCAACG TCGATATCGT CAAACACCGC
TTCGATGCGG GGATTCGTGT CGGCAGCGGC GTGGGACGAG ACATGAAGAT CGTGCGCATG
CTCGATGACT TTGCTATGCT GACCGTGGCA TCGCCAAACT ACTTATCGAG GCATCCGGAG
CCCTTGAGTC CCGGCGATCT ACGTCGTCAC AACTGCCTCA AATACAGATC GCCAGGCGAG
AATTCGATCC ATCAGTGGAC CTTGAGCGAC GGTCGTCAGA AAATGGACGT CCCCGTCGAA
GGGTCTCTTG TCGTGAACGA CCTTGATCTT CTGGTGGAGG CGGCCTTGAA CGGCGTCGGC
ATCGCCTATT TGCCGAGACC GATCGTCGAG ACTCATTTGG CAGCAGGGCG ATTGGTGCAT
GTCCTGCCGG GCTGGGAGTA CATGATGCCA GGCATTTTCC TGTTTCACCC AAGCCGGCGC
CAAGTGCCCG TACCGCTGCA GGTCTTTGTG AAATTCATAC AGAAGTGGCG AAAGACGCTG
TCGGTCGGCG TGCACCAATC ACCCTAG
|
|---|
| Protein sequence | MARVQLSELT AFVAVAERLS FTKAARELGM ALPTISQTVR SLEEDLGVRL FNRTTRSVAL
TEAGERLLAE VLPVLEGVGQ ALESINLFRE KPIGTLRLTV VRPFGLRQLA PLIRSFSAEY
PDIRLEIALD DANVDIVKHR FDAGIRVGSG VGRDMKIVRM LDDFAMLTVA SPNYLSRHPE
PLSPGDLRRH NCLKYRSPGE NSIHQWTLSD GRQKMDVPVE GSLVVNDLDL LVEAALNGVG
IAYLPRPIVE THLAAGRLVH VLPGWEYMMP GIFLFHPSRR QVPVPLQVFV KFIQKWRKTL
SVGVHQSP
|
|---|
| |