| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1921 |
|---|
| Symbol | |
|---|
| ID | 5149388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1982652 |
|---|
| End bp | 1983362 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640556865 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001238021 |
|---|
| Protein GI | 148253436 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG CCCAATTCAG GTATCTGACC TTCGATGTGG TCGGCACGCT GATCGACTTC
GAAGGCGGGA TCGTCACCAG CCTCGGCGAC ATCGCGGCGG AATCCAGCAA GGTCATCGAT
GGTGAGCAGG CGCTCAGCCT GTACCGCGCT GCACGCTACG CCGCCGACGC GGATCGTTTC
CCGGATGATC TCGTGCGCGT CTATGACGTC ATTGCACCGC AACTCGGTCT GCCCAGACAG
ACCACGCTCG GCGAGCGCTT CCGCGATTCG GCCGCGCGCT GGAAGGCGTT TCCCGACAGC
GCCGCGGCCA TGGCCCGCCT CGCCAGTCGC TACAAGCTCA TCGCAATGAC CAATGCGCGG
CGTTGGGCGC TGGATCATTT CGAGCGCGAG CTGGGTTCGC CGTTCTACGC GACCTTTACG
GTCGACGACA CCGGGACGGA GAAGCCGGAT CCCTGCTTCT TCACCCAGGT ATTCGACTTC
GTCGCACGCG ACGGCGGCAC CACCTCGCAG ATCCTGCATG TCGCGCAGAG CCAGTATCAC
GACATCGGCA TCTCCCGGCA GCTCGGCATC ACCAATTGCT GGATCGAGCG GCGTCACGAC
AAGCAGGGCT ATGGCGGCAC CATCGCGCCC GCGTCCTTCA CGAAGCCGGA TTTTCATTTC
CATTCGATGG CCGAACTGGC CGACGCGGTG GACCACGTGC CTGCGACATA A
|
|---|
| Protein sequence | MDLAQFRYLT FDVVGTLIDF EGGIVTSLGD IAAESSKVID GEQALSLYRA ARYAADADRF
PDDLVRVYDV IAPQLGLPRQ TTLGERFRDS AARWKAFPDS AAAMARLASR YKLIAMTNAR
RWALDHFERE LGSPFYATFT VDDTGTEKPD PCFFTQVFDF VARDGGTTSQ ILHVAQSQYH
DIGISRQLGI TNCWIERRHD KQGYGGTIAP ASFTKPDFHF HSMAELADAV DHVPAT
|
|---|
| |