| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1917 |
|---|
| Symbol | |
|---|
| ID | 5150465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1978127 |
|---|
| End bp | 1979401 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556861 |
|---|
| Product | oxidoreductase |
|---|
| Protein accession | YP_001238017 |
|---|
| Protein GI | 148253432 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATG TCTCCTACTG GCGCGACACT GCGGCCGCGT TTGCCGGCGG CCACACCGGG
CCCGTGGAGG GGCACTACGA CGTCGCCATC ATCGGCGGCG GCTTCACCGG ACTCGGCGCG
GCGCTGCAAC TCGCCAAGGC CGGCGCCAAG GTCATCGTGC TCGAAGCCGA CCAGGTCGGC
TCGGGCGCAT CGGGGCGCAA TGGCGGCCAT CTCAACAATG GGCTGGCACA CAGCTTCCTC
GCCGCGAAAG CCGAACTTGG CGCCGAGCGC GCCATCGCGC TCTACAAGGC GTTCGACGAC
TCGATCGATA CGCTGGAGCG CCTGATCGCG GAGGAGAACA TCGCCTGCGA TTTCCGCCGC
TGCGGCAAGC TCAAGCTCGC CTCGAAGCCC GGACATTTCG AAGGGATCGC GAGGAACTTC
GAAGCCATCA ACCGCGAGGT CGATCCGGAG ACGAAGCTGC TCTCGGCCAC CGATCTGAAA
GCCGAGATCG GCTCACCATT CCATGGCGGC ATGCTCTTCA AGAAGAGCGC GATGATGCAT
ATGGGCCGCT TCGCAGCCGG CCTCGCCACG GCGGCCAACC GCCGCGGCGC CATCATCGTC
GAACAGGCCG CGGTGACCGA GCAGGTACAG GAGGCCAAAG GGTATCGCCT GACCACGGCC
AAGGGAACGC TGCGCGCCGA GCAGGTGCTG CTGGCCACCG GCGCCTACAC GCCGTCGGCC
TTCGGCTATT TCCGCCGCCG CATCATTGCC GTCGGCAGTT TCATCATCGC GACCCGGCCG
CTGACGGCGG CCGAGGCGGC GTCGGTGCTC CCGGGCAACC GCACCTATGT CAACTCGATG
AACATCGGCA ACTACTTCCG CCTGTCGCCG GACAATCGCC TGATCTTCGG CGGCCGCGCG
CGCTTCTCCG CGACATCCGA CCAGCGGTCG GACGCCAAGA GCGGCACCAT CCTGCGGGCC
GCGATGGAAC GGATGTTCCC GCAGCTTGCA GGCATCGACA TCGAATATTG TTGGGGCGGC
CTCGTCGACA TGACCGCCGA TCGCTATCCG CGCGCTGGCC GCGAGGGCGG GCTGTGGTAC
GCGATGGGCT ATTCGGGCCA TGGCGCGCAG CTCTCGACCC ATCTCGGCAC CATCATAGCC
GATGCGATGC TCGGCCGGCC CGACAAGAAC CCGATGAAAC ATGCGCCCTG GCCGGTCGTG
CCCGGTCATT TCGGCAAGCC ATGGTTCCTG CCGTTCGTCG GCGCCTACTA CAAGACCCTG
GACTGGATCC GCTGA
|
|---|
| Protein sequence | MKYVSYWRDT AAAFAGGHTG PVEGHYDVAI IGGGFTGLGA ALQLAKAGAK VIVLEADQVG
SGASGRNGGH LNNGLAHSFL AAKAELGAER AIALYKAFDD SIDTLERLIA EENIACDFRR
CGKLKLASKP GHFEGIARNF EAINREVDPE TKLLSATDLK AEIGSPFHGG MLFKKSAMMH
MGRFAAGLAT AANRRGAIIV EQAAVTEQVQ EAKGYRLTTA KGTLRAEQVL LATGAYTPSA
FGYFRRRIIA VGSFIIATRP LTAAEAASVL PGNRTYVNSM NIGNYFRLSP DNRLIFGGRA
RFSATSDQRS DAKSGTILRA AMERMFPQLA GIDIEYCWGG LVDMTADRYP RAGREGGLWY
AMGYSGHGAQ LSTHLGTIIA DAMLGRPDKN PMKHAPWPVV PGHFGKPWFL PFVGAYYKTL
DWIR
|
|---|
| |