Gene BBta_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1895 
Symbol 
ID5149785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1961062 
End bp1961607 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID640556843 
Productputative cytochrome c 
Protein accessionYP_001237999 
Protein GI148253414 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA CTAGCAGGAG CGTTCTCGCC GTGGCGGTCG CACTCGCATT GGTCTCGCCC 
GTCCTCGCCT ATGATTTCGG TCGTCAGGCA ACGCCCGACG AGATCGCGTT ATGGGACATC
GACGTCAGGC CGGATGGCAA GGGATTGCCG CCCGGAAGCG GCACGGTGGC GGAGGGCAAG
CAGGTCTTCG CCGACAATTG TGCTGCATGC CATGGCGACA AGGGCGTCGG CGGCATCAAG
GACCGGCTGG TCGGTGGCCC GGGCACACTC GCCTCGGCAA ACCCTGTGAA AACCGTCGGC
AGCTACTGGC CCTATGCCAC GACGCTGTTC GATTACATTC ACAGGGCCAT GCCATATCAG
GCGCCAGGCT CGCTGAGCAA CGACGACACC TACGCCGTCG CCGCCTACAT TCTGAGCCTG
AACGGCATTC TGCCGGCCGA CGGCAAGCTC GATCGCGACA GCCTGCCGAG GGTGAAGATG
CCGAACCGCG ACGGCTTCGT GCCCGAGCCG GAATTCGATC CGGCGAAGCT GTTCCGAAAG
CAATGA
 
Protein sequence
MSSTSRSVLA VAVALALVSP VLAYDFGRQA TPDEIALWDI DVRPDGKGLP PGSGTVAEGK 
QVFADNCAAC HGDKGVGGIK DRLVGGPGTL ASANPVKTVG SYWPYATTLF DYIHRAMPYQ
APGSLSNDDT YAVAAYILSL NGILPADGKL DRDSLPRVKM PNRDGFVPEP EFDPAKLFRK
Q