Gene BBta_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1836 
Symbol 
ID5154120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1902755 
End bp1903849 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID640556788 
ProductABC transporter, atp_binding subunit 
Protein accessionYP_001237945 
Protein GI148253360 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.382756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGAAGC ATCGCCTTGT CCAGCGCCAT CCTTGTGTCG TCCCGGAAAC CCGCATGTCC 
CTCCTCGAAC TCGACCGCGT CGGAAAATCC TTCGGCCCCA ACACGGCCGT CGAAGAGTTC
AGCCTCGCTG TCACCAAGGG CGAGTTCATC TCGTTTCTCG GCCCGTCCGG CTGCGGCAAG
ACGACGACTT TGCAGATGAT CGCGGGTTTC CTCGATCCGT CCCACGGCAC GATTAGGCTC
GAAGGCAAGG ACCTCGTCGC CATGCCGCCG GCCAAGCGCG GGCTCGGCAT CGTGTTTCAG
AGCTATGCGC TGTTTCCGCA CATGACGGCC GCCGAGAACG TCGCCTTCGG CCTCGAGATG
CGCAAAGTGC CGCGCGACGA GCGTGACGAG CGCGTGCGTA AGGCGCTCGC GCTTGTCGGT
CTGGCCGGCT ACGAAGGCCG GCACCCGCGC CGCATGTCCG GCGGCCAGCA GCAGCGTGTC
GCGCTGGCAC GCGCGCTGGT CATCCGTCCG TCGGTGCTGC TGCTCGACGA ACCCTTGTCC
AATCTGGATG CGCGGCTGCG CGAGGACATG CAGATCGAGC TGCGCCAGAT CCAGCGCAAT
CTCGGCACCA CGACGATCCT CGTGACCCAC GACCAGATCG AGGCGATGTC GCTGTCCGAC
CGCATCGTCG TGATGAGCAA AGGCAAGATC GAGCAGATCG GCACGCCGCA GCAGGTCTAT
GAGCAGCCGG CTTCGGCCTT CGTCGCGCAG TTTCTCGGCA AGACCAATGA GTTCGCGGCC
GAGGTGGAGC GCACTGCCGG GCTAGCCAGG CTCGTTGCGG GCTCGTGGAG CGCGCCGGCG
CCGGCCGGCG CCACCGGGAC GGTGACCATC AGCGTGCGCC CCGAGCGCAT CAGCTTCGGC
AGTTCCGGCC TCGCGGGGCG GATCACCAGC CGCATCTTCC AGGGCAATCA CTGGCTGTTC
CAGTGCGACA CGGAATGCGG CCCCGCGATC GTGATCCGTC AGAATGACGG CCAGCCGCAG
CCGGACCAGG GCGAAACAGT GCACCTGATC TGGCAGGACT CCGACATGAG CCTGCGGGCG
AGCGTGGCCG CATGA
 
Protein sequence
MQKHRLVQRH PCVVPETRMS LLELDRVGKS FGPNTAVEEF SLAVTKGEFI SFLGPSGCGK 
TTTLQMIAGF LDPSHGTIRL EGKDLVAMPP AKRGLGIVFQ SYALFPHMTA AENVAFGLEM
RKVPRDERDE RVRKALALVG LAGYEGRHPR RMSGGQQQRV ALARALVIRP SVLLLDEPLS
NLDARLREDM QIELRQIQRN LGTTTILVTH DQIEAMSLSD RIVVMSKGKI EQIGTPQQVY
EQPASAFVAQ FLGKTNEFAA EVERTAGLAR LVAGSWSAPA PAGATGTVTI SVRPERISFG
SSGLAGRITS RIFQGNHWLF QCDTECGPAI VIRQNDGQPQ PDQGETVHLI WQDSDMSLRA
SVAA