| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1720 |
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| Symbol | |
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| ID | 5154610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1793590 |
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| End bp | 1795185 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640556677 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001237835 |
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| Protein GI | 148253250 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.908269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.310447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGA TTTCCACGAT TTTCATCGCC ATCTGCATGG TTCTGGTCGC GGCTTCGCTC
GGCCTGATCC TGTATTCGGT GGCCGGTATG AGTGGCTCGG AATCTGCGAT CGTCGCACTC
GCCGCGCTGA CCTTCCTCAT CCTCTACAAC GCCGTGTCGA TGCGGCTGCG CGACCGCTCC
GACGTCGGCA GCCAGATTGC TGATCTGTCG CGCGGCACCG CCGATCTCGC GCGCCAAGTC
GCCGAGTTCG GTCGCCGCCT GTCCGCGGTC GAAGGGCGCG TGGTGTCGTC GAATTCGGTC
AGCACCGACC GCCTGCAGGG CGTGATCAGC GAGATCAACG AGCTCGGCGG CCTGATGAAG
CAGCTCGCCG TCACGGTCGC ACAGCACGAG GATCTGATCG CCGCGATCCC CTCTCAGGCC
CAGCCAGCAG CATCGGCACC GACACCGTCT GCTTCGGCGG AACCCGTGCG TCCTGCTGCG
GCCGCACCGG CTTCGACTCC AGTCGTGGAG CCCAAAATCG CCCCCGCGAC CGCGCCCGAG
GTGAAGCCGG CCGAGCCCAG CATGCGCGTC ACGCCTCCCG CCGGCCTGAC GCCTGCGAAG
CCGGTCCCGT CGCAGCCGAG CCCCTCGCCT GTCGCGACCA ACGCGCCCCC GGCCGCTGCC
GCAGCCCCCG CCGCCCCGCG CAGCCAGCCG CAGATGCTCG CCGCCGTAAA GGCTGCGCTC
GACGACAACC GTCTCGACAT TTATCTGCAG CCGCTGGTGA CGCTGCCACA ACGCAAGGTG
CGATTCTACG AAGCGGTGAC ACGGCTGCGC GACGAGCGCG ACCAGGTGCT TGCCGCCGAC
GACTTCATCG GCATCGCGGA GGCGGCCGGC CTGGTGGGGC GCATCGACCA CATGGTGATG
CTCCGCTGCG TGCAGGTGCT GCGCCGGCTG ATGGTGCGCA ACAAGGAGGT CGGGATCTTC
TGCAACGTCT CGTCGGCCAC CCTGAGCAGC CCCGCCAACT TCTCACAGTG CCTGGATTTC
CTGGAAGCCA ACCGCGCGCT GGCGCCGTCC TTCGTGCTCG AATTCAAGCA GGCGACGTTG
CGCAACCTCG GCCCGACCGA GACCGAGCAT CTCGCGGCGC TCGCCCAGCG CGGCTATCGT
TTCTCGATGG ACCACGTCAC CGAATTGCGG TTCGAGCCGC GCGAGCTCGC CGACCGCGGC
ATCCGCTTCA TCAAGGTGCC GGCGGCGCTG CTGCTCGATC CCAAGCAGGG CTCGGTGTCC
GACATCCACC CGACCGACCT CTCCGACCTG CTGGGCCGCT TCGGCATCGA CCTGATCGCC
GAGCGGATCG AGGGCGAGCG CAGCGTCATC GACCTGCTCG ACTACGACGT CCGGTTCGGC
CAGGGCTTCC TGTTCGCCCC GCCGCGGCCA TTGCGGCCCG AGGGTTCATC TGCTACCGGC
GTGGCCGCTG CGGCCTCCCC TGGAGGCGGG CAGGACATCA AGATTCAGGA TCCCAATGCC
GCCGGCCCTC ATTCCTCCGA CGCGTCAACC ACCAGCGCCT CACCGCGAAG CGTCGGCAAT
GCTGCACTGG CGCGTCGCAT CGCCGGACCG GCCTGA
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| Protein sequence | MIRISTIFIA ICMVLVAASL GLILYSVAGM SGSESAIVAL AALTFLILYN AVSMRLRDRS
DVGSQIADLS RGTADLARQV AEFGRRLSAV EGRVVSSNSV STDRLQGVIS EINELGGLMK
QLAVTVAQHE DLIAAIPSQA QPAASAPTPS ASAEPVRPAA AAPASTPVVE PKIAPATAPE
VKPAEPSMRV TPPAGLTPAK PVPSQPSPSP VATNAPPAAA AAPAAPRSQP QMLAAVKAAL
DDNRLDIYLQ PLVTLPQRKV RFYEAVTRLR DERDQVLAAD DFIGIAEAAG LVGRIDHMVM
LRCVQVLRRL MVRNKEVGIF CNVSSATLSS PANFSQCLDF LEANRALAPS FVLEFKQATL
RNLGPTETEH LAALAQRGYR FSMDHVTELR FEPRELADRG IRFIKVPAAL LLDPKQGSVS
DIHPTDLSDL LGRFGIDLIA ERIEGERSVI DLLDYDVRFG QGFLFAPPRP LRPEGSSATG
VAAAASPGGG QDIKIQDPNA AGPHSSDAST TSASPRSVGN AALARRIAGP A
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