| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1719 |
|---|
| Symbol | |
|---|
| ID | 5154609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1792720 |
|---|
| End bp | 1793574 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640556676 |
|---|
| Product | putative hydrolase |
|---|
| Protein accession | YP_001237834 |
|---|
| Protein GI | 148253249 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.265588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCGC TGCACTTCGA AGAGCGGCTG CGCGACCTGG TCGGCCGCAA GCAGGTCGTG
CTGAGCGACA TCTGGGGCGT GGTCCATAAC GGGCTGGAAT CCTTTCCCGA GGCCTGCGAG
GCGTTGCATT GCTTCAGGCG CGAGGGCGGT ACGGTGATCC TGATCACCAA TGCGCCGCGG
CCGGCCGATT CCGTGCAGCG GCAGCTGCGC AAGCTCGGCG TGGCCGACGA GGTCTACAGC
GCCATCGTCT CCTCCGGCGA CCTGACCCGC CATTACGTGG CGGACCATCC CGGCGGCAAG
GTGTTCTGGC TCGGCCCCGA GCGCGACAAC TCGATCCATC GCGGCCTCGA GGTGACCCTG
TCGCCGCAGG ACGAGGCCGA CTACATCATC TGCACCGGCC TCTACGACGA CGAGACCGAG
ACCGCCGAGG ATTACCGGCC GATGCTGCTT CGCGCGCTGG AGCGCAAGCT GCCGCTGATC
TGCGCCAATC CGGACATCGT GGTCGAACGC GGCGACCGCC TGATCTACTG CGCCGGCGCC
ATCGCCGAAC TCTACCGCGA ACTCGGCGGC GAGGTGATCT TCTACGGCAA GCCGCACCGG
CCGATCTACG AACGCGCCAT GCGGCTCGCC GAGCAGCATG CCGGCCGGCC GGTCGCGCGC
GAGGAGGTGC TCGCGATCGG CGATTCCGTC CGCACCGACC TCGCCGGCGC GCATGCTTTC
GGCATCGACT GCCTGTTCGT GACCCGCGGC ATTCATTCCG AGGAGTTCGC CGGCGTCGAT
CAGCTCGATC CGGCCTCGGT CAAGGAGCTG TTCGGCCATC CGCCGCGCGC CCTGATGCGG
GAATTGAAGT GGTAA
|
|---|
| Protein sequence | MTSLHFEERL RDLVGRKQVV LSDIWGVVHN GLESFPEACE ALHCFRREGG TVILITNAPR
PADSVQRQLR KLGVADEVYS AIVSSGDLTR HYVADHPGGK VFWLGPERDN SIHRGLEVTL
SPQDEADYII CTGLYDDETE TAEDYRPMLL RALERKLPLI CANPDIVVER GDRLIYCAGA
IAELYRELGG EVIFYGKPHR PIYERAMRLA EQHAGRPVAR EEVLAIGDSV RTDLAGAHAF
GIDCLFVTRG IHSEEFAGVD QLDPASVKEL FGHPPRALMR ELKW
|
|---|
| |