Gene BBta_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1709 
Symbol 
ID5154708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1781200 
End bp1781619 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID640556666 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001237824 
Protein GI148253239 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.44949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGA TTTCCCGCGA CCTCGCCATC GACGAAAACG ACATCGAGAT CTCGTTCGTC 
CGCGCCTCCG GCCCCGGCGG ACAGAACGTC AACAAGCTGT CGACCTCGGC CCAGTTGCGC
TTCGACACCA GCAGGATCAC GCTGCCGGAG GATGCGGCGG CACGGCTGGC GCGCCTCGCG
GGCCAGCGCA TGACCAAGAA CGGCGTCATC GTGATCCAGG CCGAACGCTT CCGCACCCAG
GAGCGCAACA AGGCCGACGC CATCGAACGT CTCGTGACGC TGCTGCGCGA AGCGATGGTG
CGGCCGAAGG TGCGGCGCCC GACCAAGCCG ACTTTCGGCT CCAAGCAGCG CCGGCTCGAA
GGCAAAAAGC TCCGCAGCGA CGTCAAGGCG GGACGCGGCG CGCGCCGTTT CGACGATTAG
 
Protein sequence
MLRISRDLAI DENDIEISFV RASGPGGQNV NKLSTSAQLR FDTSRITLPE DAAARLARLA 
GQRMTKNGVI VIQAERFRTQ ERNKADAIER LVTLLREAMV RPKVRRPTKP TFGSKQRRLE
GKKLRSDVKA GRGARRFDD